Hb_000608_330

Information

Type -
Description -
Location Contig608: 159707-166667
Sequence    

Annotation

kegg
ID rcu:RCOM_0593000
description Zeamatin precursor, putative
nr
ID XP_002526892.1
description Zeamatin precursor, putative [Ricinus communis]
swissprot
ID P50694
description Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1
trembl
ID B9SLM3
description Zeamatin, putative OS=Ricinus communis GN=RCOM_0593000 PE=4 SV=1
Gene Ontology
ID GO:0005488
description thaumatin-like protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000608_330 0.0 - - Zeamatin precursor, putative [Ricinus communis]
2 Hb_001390_080 0.1006019489 - - structural constituent of cell wall, putative [Ricinus communis]
3 Hb_000628_010 0.1056395486 - - PREDICTED: uncharacterized protein LOC105795966 [Gossypium raimondii]
4 Hb_008643_050 0.109913067 - - PREDICTED: uncharacterized protein LOC105160092 [Sesamum indicum]
5 Hb_003228_090 0.1263652801 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105637258 [Jatropha curcas]
6 Hb_000115_040 0.1285853975 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000627_010 0.1311233255 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
8 Hb_134546_010 0.1939739255 - - PREDICTED: uncharacterized protein LOC105107372 [Populus euphratica]
9 Hb_153636_010 0.2561701995 - - PREDICTED: receptor-like protein kinase [Jatropha curcas]
10 Hb_000049_220 0.2653101508 - - ammonium transporter, putative [Ricinus communis]
11 Hb_012090_020 0.2728896503 - - PREDICTED: probable beta-1,3-galactosyltransferase 2 [Jatropha curcas]
12 Hb_046615_030 0.2791069539 - - PREDICTED: BTB/POZ domain-containing protein At3g22104-like [Jatropha curcas]
13 Hb_032733_020 0.2831988611 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180-like isoform X4 [Citrus sinensis]
14 Hb_027380_240 0.2843783754 - - PREDICTED: phospholipase A1-Igamma1, chloroplastic [Jatropha curcas]
15 Hb_001488_320 0.2887200879 transcription factor TF Family: TCP Plastid transcription factor 1, putative isoform 1 [Theobroma cacao]
16 Hb_000189_400 0.2887557654 - - hypothetical protein CathTA2_0066 [Caldalkalibacillus thermarum TA2.A1]
17 Hb_126077_010 0.2910593328 - - -
18 Hb_001024_010 0.2910895103 - - phosphofructokinase [Hevea brasiliensis]
19 Hb_000028_290 0.2910917076 - - hypothetical protein JCGZ_25310 [Jatropha curcas]
20 Hb_052135_050 0.291200417 - - PREDICTED: probable pectinesterase 67 [Jatropha curcas]

Gene co-expression network

sample Hb_000608_330 Hb_000608_330 Hb_001390_080 Hb_001390_080 Hb_000608_330--Hb_001390_080 Hb_000628_010 Hb_000628_010 Hb_000608_330--Hb_000628_010 Hb_008643_050 Hb_008643_050 Hb_000608_330--Hb_008643_050 Hb_003228_090 Hb_003228_090 Hb_000608_330--Hb_003228_090 Hb_000115_040 Hb_000115_040 Hb_000608_330--Hb_000115_040 Hb_000627_010 Hb_000627_010 Hb_000608_330--Hb_000627_010 Hb_001390_080--Hb_000628_010 Hb_001390_080--Hb_008643_050 Hb_001390_080--Hb_000627_010 Hb_001390_080--Hb_000115_040 Hb_001390_080--Hb_003228_090 Hb_000628_010--Hb_008643_050 Hb_000628_010--Hb_000627_010 Hb_000628_010--Hb_000115_040 Hb_000628_010--Hb_003228_090 Hb_008643_050--Hb_000627_010 Hb_008643_050--Hb_000115_040 Hb_008643_050--Hb_003228_090 Hb_153636_010 Hb_153636_010 Hb_003228_090--Hb_153636_010 Hb_003228_090--Hb_000627_010 Hb_000115_040--Hb_000627_010 Hb_184798_050 Hb_184798_050 Hb_000115_040--Hb_184798_050 Hb_003693_060 Hb_003693_060 Hb_000627_010--Hb_003693_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0081807 0 0.0121253 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.0310297

CAGE analysis