Hb_008408_050

Information

Type -
Description -
Location Contig8408: 73306-78840
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008408_050 0.0 - - -
2 Hb_153636_010 0.2207603531 - - PREDICTED: receptor-like protein kinase [Jatropha curcas]
3 Hb_001579_210 0.2380874405 - - conserved hypothetical protein [Ricinus communis]
4 Hb_003228_090 0.2634035609 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105637258 [Jatropha curcas]
5 Hb_075722_010 0.2773501309 - - hypothetical protein JCGZ_01984 [Jatropha curcas]
6 Hb_003417_070 0.2846274789 - - hypothetical protein MIMGU_mgv1a018902mg [Erythranthe guttata]
7 Hb_012090_020 0.3048436786 - - PREDICTED: probable beta-1,3-galactosyltransferase 2 [Jatropha curcas]
8 Hb_000351_150 0.3078138303 - - Wall-associated kinase 2, putative [Theobroma cacao]
9 Hb_038508_010 0.3083064574 - - PREDICTED: uncharacterized protein LOC105638675 [Jatropha curcas]
10 Hb_056550_010 0.311305656 - - PREDICTED: uncharacterized protein LOC104112577 [Nicotiana tomentosiformis]
11 Hb_000155_240 0.3159767576 - - PREDICTED: uncharacterized protein LOC104888642 [Beta vulgaris subsp. vulgaris]
12 Hb_004738_060 0.3165378153 - - predicted protein [Arabidopsis lyrata subsp. lyrata]
13 Hb_001390_080 0.3265482552 - - structural constituent of cell wall, putative [Ricinus communis]
14 Hb_000789_140 0.3267561925 - - PREDICTED: uncharacterized protein LOC105650390, partial [Jatropha curcas]
15 Hb_008643_050 0.3276980615 - - PREDICTED: uncharacterized protein LOC105160092 [Sesamum indicum]
16 Hb_000628_010 0.3297887564 - - PREDICTED: uncharacterized protein LOC105795966 [Gossypium raimondii]
17 Hb_000059_120 0.3372490557 - - JHL22C18.10 [Jatropha curcas]
18 Hb_012235_010 0.3384240298 - - PREDICTED: uncharacterized protein LOC104094989 [Nicotiana tomentosiformis]
19 Hb_000608_330 0.341321344 - - Zeamatin precursor, putative [Ricinus communis]
20 Hb_016354_010 0.3417977433 - - -

Gene co-expression network

sample Hb_008408_050 Hb_008408_050 Hb_153636_010 Hb_153636_010 Hb_008408_050--Hb_153636_010 Hb_001579_210 Hb_001579_210 Hb_008408_050--Hb_001579_210 Hb_003228_090 Hb_003228_090 Hb_008408_050--Hb_003228_090 Hb_075722_010 Hb_075722_010 Hb_008408_050--Hb_075722_010 Hb_003417_070 Hb_003417_070 Hb_008408_050--Hb_003417_070 Hb_012090_020 Hb_012090_020 Hb_008408_050--Hb_012090_020 Hb_153636_010--Hb_003228_090 Hb_008643_050 Hb_008643_050 Hb_153636_010--Hb_008643_050 Hb_001390_080 Hb_001390_080 Hb_153636_010--Hb_001390_080 Hb_000628_010 Hb_000628_010 Hb_153636_010--Hb_000628_010 Hb_016354_010 Hb_016354_010 Hb_153636_010--Hb_016354_010 Hb_000920_090 Hb_000920_090 Hb_001579_210--Hb_000920_090 Hb_001579_210--Hb_153636_010 Hb_001579_210--Hb_003228_090 Hb_012049_030 Hb_012049_030 Hb_001579_210--Hb_012049_030 Hb_000351_150 Hb_000351_150 Hb_001579_210--Hb_000351_150 Hb_000608_330 Hb_000608_330 Hb_003228_090--Hb_000608_330 Hb_003228_090--Hb_001390_080 Hb_003228_090--Hb_000628_010 Hb_003228_090--Hb_008643_050 Hb_000627_010 Hb_000627_010 Hb_003228_090--Hb_000627_010 Hb_075722_010--Hb_000351_150 Hb_056550_010 Hb_056550_010 Hb_075722_010--Hb_056550_010 Hb_038508_010 Hb_038508_010 Hb_075722_010--Hb_038508_010 Hb_000155_240 Hb_000155_240 Hb_075722_010--Hb_000155_240 Hb_087426_010 Hb_087426_010 Hb_075722_010--Hb_087426_010 Hb_000789_140 Hb_000789_140 Hb_075722_010--Hb_000789_140 Hb_081703_020 Hb_081703_020 Hb_003417_070--Hb_081703_020 Hb_156850_130 Hb_156850_130 Hb_003417_070--Hb_156850_130 Hb_002960_070 Hb_002960_070 Hb_003417_070--Hb_002960_070 Hb_008783_010 Hb_008783_010 Hb_003417_070--Hb_008783_010 Hb_003417_070--Hb_153636_010 Hb_122028_010 Hb_122028_010 Hb_012090_020--Hb_122028_010 Hb_012090_020--Hb_001390_080 Hb_012090_020--Hb_000628_010 Hb_012090_020--Hb_008643_050 Hb_134546_010 Hb_134546_010 Hb_012090_020--Hb_134546_010 Hb_031866_030 Hb_031866_030 Hb_012090_020--Hb_031866_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.318397 0 0.0955127 0 0 0.0372794
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0312563 0.296669

CAGE analysis