Hb_081703_020

Information

Type -
Description -
Location Contig81703: 762-1070
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_081703_020 0.0 - - -
2 Hb_003417_070 0.2051414745 - - hypothetical protein MIMGU_mgv1a018902mg [Erythranthe guttata]
3 Hb_153636_010 0.2820305428 - - PREDICTED: receptor-like protein kinase [Jatropha curcas]
4 Hb_015778_020 0.2898809673 - - Putative methyltransferase family protein [Solanum demissum]
5 Hb_010452_010 0.3007673736 - - PREDICTED: uncharacterized protein LOC104232369 [Nicotiana sylvestris]
6 Hb_003228_090 0.3071233142 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105637258 [Jatropha curcas]
7 Hb_032634_010 0.313143053 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
8 Hb_156850_130 0.3258964833 - - conserved hypothetical protein [Ricinus communis]
9 Hb_002960_070 0.3370245278 - - -
10 Hb_008408_050 0.3448009799 - - -
11 Hb_001390_080 0.3524133869 - - structural constituent of cell wall, putative [Ricinus communis]
12 Hb_004724_050 0.3528493922 transcription factor TF Family: bZIP conserved hypothetical protein [Ricinus communis]
13 Hb_008643_050 0.3533786976 - - PREDICTED: uncharacterized protein LOC105160092 [Sesamum indicum]
14 Hb_000628_010 0.3550366739 - - PREDICTED: uncharacterized protein LOC105795966 [Gossypium raimondii]
15 Hb_002520_010 0.3636431463 - - PREDICTED: uncharacterized protein LOC105775392, partial [Gossypium raimondii]
16 Hb_001579_210 0.3642260128 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000608_330 0.3654004603 - - Zeamatin precursor, putative [Ricinus communis]
18 Hb_083663_010 0.3676702891 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
19 Hb_015076_020 0.3691950778 - - IMP dehydrogenase/GMP reductase [Hevea brasiliensis]
20 Hb_000059_120 0.3729861144 - - JHL22C18.10 [Jatropha curcas]

Gene co-expression network

sample Hb_081703_020 Hb_081703_020 Hb_003417_070 Hb_003417_070 Hb_081703_020--Hb_003417_070 Hb_153636_010 Hb_153636_010 Hb_081703_020--Hb_153636_010 Hb_015778_020 Hb_015778_020 Hb_081703_020--Hb_015778_020 Hb_010452_010 Hb_010452_010 Hb_081703_020--Hb_010452_010 Hb_003228_090 Hb_003228_090 Hb_081703_020--Hb_003228_090 Hb_032634_010 Hb_032634_010 Hb_081703_020--Hb_032634_010 Hb_156850_130 Hb_156850_130 Hb_003417_070--Hb_156850_130 Hb_002960_070 Hb_002960_070 Hb_003417_070--Hb_002960_070 Hb_008783_010 Hb_008783_010 Hb_003417_070--Hb_008783_010 Hb_008408_050 Hb_008408_050 Hb_003417_070--Hb_008408_050 Hb_003417_070--Hb_153636_010 Hb_153636_010--Hb_003228_090 Hb_008643_050 Hb_008643_050 Hb_153636_010--Hb_008643_050 Hb_001390_080 Hb_001390_080 Hb_153636_010--Hb_001390_080 Hb_000628_010 Hb_000628_010 Hb_153636_010--Hb_000628_010 Hb_153636_010--Hb_008408_050 Hb_016354_010 Hb_016354_010 Hb_153636_010--Hb_016354_010 Hb_015778_020--Hb_010452_010 Hb_015076_020 Hb_015076_020 Hb_015778_020--Hb_015076_020 Hb_083663_010 Hb_083663_010 Hb_015778_020--Hb_083663_010 Hb_002520_010 Hb_002520_010 Hb_015778_020--Hb_002520_010 Hb_000505_120 Hb_000505_120 Hb_015778_020--Hb_000505_120 Hb_056095_010 Hb_056095_010 Hb_015778_020--Hb_056095_010 Hb_010452_010--Hb_015076_020 Hb_010452_010--Hb_056095_010 Hb_010452_010--Hb_083663_010 Hb_004241_030 Hb_004241_030 Hb_010452_010--Hb_004241_030 Hb_010452_010--Hb_000505_120 Hb_000608_330 Hb_000608_330 Hb_003228_090--Hb_000608_330 Hb_003228_090--Hb_001390_080 Hb_003228_090--Hb_000628_010 Hb_003228_090--Hb_008643_050 Hb_000627_010 Hb_000627_010 Hb_003228_090--Hb_000627_010 Hb_173121_010 Hb_173121_010 Hb_032634_010--Hb_173121_010 Hb_019617_010 Hb_019617_010 Hb_032634_010--Hb_019617_010 Hb_005822_030 Hb_005822_030 Hb_032634_010--Hb_005822_030 Hb_003927_060 Hb_003927_060 Hb_032634_010--Hb_003927_060 Hb_000608_430 Hb_000608_430 Hb_032634_010--Hb_000608_430
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.398313 0.165424 0.132675 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.4299

CAGE analysis