Hb_015076_020

Information

Type -
Description -
Location Contig15076: 6839-12564
Sequence    

Annotation

kegg
ID tcc:TCM_038504
description hypothetical protein
nr
ID ABK51384.1
description IMP dehydrogenase/GMP reductase [Hevea brasiliensis]
swissprot
ID -
description -
trembl
ID A0MZQ2
description IMP dehydrogenase/GMP reductase (Fragment) OS=Hevea brasiliensis PE=2 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_015076_020 0.0 - - IMP dehydrogenase/GMP reductase [Hevea brasiliensis]
2 Hb_000505_120 0.1382773355 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
3 Hb_008783_010 0.1546313297 - - -
4 Hb_010452_010 0.1817347032 - - PREDICTED: uncharacterized protein LOC104232369 [Nicotiana sylvestris]
5 Hb_011280_020 0.1942311773 - - polyprotein [Oryza australiensis]
6 Hb_015778_020 0.1946565238 - - Putative methyltransferase family protein [Solanum demissum]
7 Hb_004241_030 0.1983401829 - - conserved hypothetical protein [Ricinus communis]
8 Hb_158203_010 0.2109783049 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
9 Hb_121041_010 0.2204178756 - - PREDICTED: uncharacterized protein LOC105778857 [Gossypium raimondii]
10 Hb_000089_050 0.2236619503 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
11 Hb_003413_010 0.2426807121 - - hypothetical protein, partial [Pseudomonas fluorescens]
12 Hb_056095_010 0.2465240031 - - conserved hypothetical protein [Ricinus communis]
13 Hb_006040_150 0.2561615051 - - -
14 Hb_097006_010 0.2608133567 - - PREDICTED: uncharacterized protein LOC105632410 [Jatropha curcas]
15 Hb_013420_040 0.2626536064 - - unnamed protein product [Vitis vinifera]
16 Hb_000136_080 0.2679285014 - - hypothetical protein AALP_AA8G499800 [Arabis alpina]
17 Hb_033066_030 0.2814776988 - - hypothetical protein PRUPE_ppa016115mg [Prunus persica]
18 Hb_002060_040 0.2816418438 - - putative polyprotein [Oryza sativa Japonica Group]
19 Hb_031866_030 0.2849758548 - - PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis melo]
20 Hb_009152_030 0.2880290647 - - hypothetical protein L484_026849 [Morus notabilis]

Gene co-expression network

sample Hb_015076_020 Hb_015076_020 Hb_000505_120 Hb_000505_120 Hb_015076_020--Hb_000505_120 Hb_008783_010 Hb_008783_010 Hb_015076_020--Hb_008783_010 Hb_010452_010 Hb_010452_010 Hb_015076_020--Hb_010452_010 Hb_011280_020 Hb_011280_020 Hb_015076_020--Hb_011280_020 Hb_015778_020 Hb_015778_020 Hb_015076_020--Hb_015778_020 Hb_004241_030 Hb_004241_030 Hb_015076_020--Hb_004241_030 Hb_000505_120--Hb_011280_020 Hb_000505_120--Hb_008783_010 Hb_003413_010 Hb_003413_010 Hb_000505_120--Hb_003413_010 Hb_000505_120--Hb_004241_030 Hb_097006_010 Hb_097006_010 Hb_000505_120--Hb_097006_010 Hb_008783_010--Hb_011280_020 Hb_008783_010--Hb_097006_010 Hb_010164_040 Hb_010164_040 Hb_008783_010--Hb_010164_040 Hb_008783_010--Hb_004241_030 Hb_010452_010--Hb_015778_020 Hb_056095_010 Hb_056095_010 Hb_010452_010--Hb_056095_010 Hb_083663_010 Hb_083663_010 Hb_010452_010--Hb_083663_010 Hb_010452_010--Hb_004241_030 Hb_010452_010--Hb_000505_120 Hb_011280_020--Hb_003413_010 Hb_011280_020--Hb_083663_010 Hb_011280_020--Hb_004241_030 Hb_015778_020--Hb_083663_010 Hb_002520_010 Hb_002520_010 Hb_015778_020--Hb_002520_010 Hb_015778_020--Hb_000505_120 Hb_015778_020--Hb_056095_010 Hb_000574_140 Hb_000574_140 Hb_004241_030--Hb_000574_140 Hb_004687_010 Hb_004687_010 Hb_004241_030--Hb_004687_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0154164 0.0127018 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.005466 0.0585329

CAGE analysis