Hb_010164_040

Information

Type -
Description -
Location Contig10164: 15470-20261
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa015000mg
description hypothetical protein
nr
ID XP_007200265.1
description hypothetical protein PRUPE_ppa015000mg [Prunus persica]
swissprot
ID P0CT39
description Transposon Tf2-6 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-6 PE=3 SV=1
trembl
ID M5VK25
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015000mg PE=4 SV=1
Gene Ontology
ID GO:0003676
description retrotransposon ty3-gypsy subclass

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010164_040 0.0 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
2 Hb_097006_010 0.0473437868 - - PREDICTED: uncharacterized protein LOC105632410 [Jatropha curcas]
3 Hb_008783_010 0.2231938616 - - -
4 Hb_128193_010 0.2255054499 - - PREDICTED: uncharacterized protein LOC103699534, partial [Phoenix dactylifera]
5 Hb_001241_050 0.240755137 - - PREDICTED: uncharacterized protein LOC104880586 isoform X1 [Vitis vinifera]
6 Hb_129046_010 0.2432730274 - - PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Elaeis guineensis]
7 Hb_001629_040 0.2434802077 - - hypothetical protein POPTR_0001s41630g [Populus trichocarpa]
8 Hb_110782_010 0.2484517481 - - PREDICTED: uncharacterized protein LOC105797448 [Gossypium raimondii]
9 Hb_020400_010 0.2538327821 - - PREDICTED: uncharacterized protein LOC105644073 [Jatropha curcas]
10 Hb_000009_010 0.2570164554 - - PREDICTED: ABC transporter G family member 10-like [Jatropha curcas]
11 Hb_000505_120 0.2649425937 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
12 Hb_000832_010 0.2656263548 - - hypothetical protein VITISV_005044 [Vitis vinifera]
13 Hb_014967_010 0.2675302925 - - -
14 Hb_001871_030 0.2680986017 - - conserved hypothetical protein [Ricinus communis]
15 Hb_159404_010 0.2728470693 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
16 Hb_002733_050 0.2805468456 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
17 Hb_009557_010 0.2806639879 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
18 Hb_006013_030 0.2811839903 - - -
19 Hb_169514_010 0.2829762384 - - PREDICTED: uncharacterized protein LOC103331076 [Prunus mume]
20 Hb_002729_020 0.2835003104 - - PREDICTED: uncharacterized protein LOC104804969, partial [Tarenaya hassleriana]

Gene co-expression network

sample Hb_010164_040 Hb_010164_040 Hb_097006_010 Hb_097006_010 Hb_010164_040--Hb_097006_010 Hb_008783_010 Hb_008783_010 Hb_010164_040--Hb_008783_010 Hb_128193_010 Hb_128193_010 Hb_010164_040--Hb_128193_010 Hb_001241_050 Hb_001241_050 Hb_010164_040--Hb_001241_050 Hb_129046_010 Hb_129046_010 Hb_010164_040--Hb_129046_010 Hb_001629_040 Hb_001629_040 Hb_010164_040--Hb_001629_040 Hb_097006_010--Hb_008783_010 Hb_000505_120 Hb_000505_120 Hb_097006_010--Hb_000505_120 Hb_097006_010--Hb_128193_010 Hb_097006_010--Hb_001241_050 Hb_097006_010--Hb_001629_040 Hb_008783_010--Hb_000505_120 Hb_015076_020 Hb_015076_020 Hb_008783_010--Hb_015076_020 Hb_011280_020 Hb_011280_020 Hb_008783_010--Hb_011280_020 Hb_004241_030 Hb_004241_030 Hb_008783_010--Hb_004241_030 Hb_128193_010--Hb_001629_040 Hb_000009_010 Hb_000009_010 Hb_128193_010--Hb_000009_010 Hb_009557_010 Hb_009557_010 Hb_128193_010--Hb_009557_010 Hb_023142_010 Hb_023142_010 Hb_128193_010--Hb_023142_010 Hb_031866_030 Hb_031866_030 Hb_128193_010--Hb_031866_030 Hb_009152_030 Hb_009152_030 Hb_128193_010--Hb_009152_030 Hb_004687_010 Hb_004687_010 Hb_001241_050--Hb_004687_010 Hb_000612_050 Hb_000612_050 Hb_001241_050--Hb_000612_050 Hb_000574_140 Hb_000574_140 Hb_001241_050--Hb_000574_140 Hb_006103_040 Hb_006103_040 Hb_001241_050--Hb_006103_040 Hb_003183_010 Hb_003183_010 Hb_129046_010--Hb_003183_010 Hb_131320_010 Hb_131320_010 Hb_129046_010--Hb_131320_010 Hb_000975_260 Hb_000975_260 Hb_129046_010--Hb_000975_260 Hb_000169_100 Hb_000169_100 Hb_129046_010--Hb_000169_100 Hb_000675_040 Hb_000675_040 Hb_129046_010--Hb_000675_040 Hb_002631_270 Hb_002631_270 Hb_129046_010--Hb_002631_270 Hb_001629_040--Hb_000009_010 Hb_001629_040--Hb_031866_030 Hb_001629_040--Hb_009152_030 Hb_002060_040 Hb_002060_040 Hb_001629_040--Hb_002060_040 Hb_033066_030 Hb_033066_030 Hb_001629_040--Hb_033066_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0043704 0.00359132 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0123363 0.0167108

CAGE analysis