Hb_009152_030

Information

Type -
Description -
Location Contig9152: 38303-42629
Sequence    

Annotation

kegg
ID -
description -
nr
ID XP_010097958.1
description hypothetical protein L484_026849 [Morus notabilis]
swissprot
ID -
description -
trembl
ID W9RGK9
description Uncharacterized protein OS=Morus notabilis GN=L484_026849 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009152_030 0.0 - - hypothetical protein L484_026849 [Morus notabilis]
2 Hb_031866_030 0.0431576651 - - PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis melo]
3 Hb_002060_040 0.0518552649 - - putative polyprotein [Oryza sativa Japonica Group]
4 Hb_033066_030 0.0524040154 - - hypothetical protein PRUPE_ppa016115mg [Prunus persica]
5 Hb_000009_010 0.1171038565 - - PREDICTED: ABC transporter G family member 10-like [Jatropha curcas]
6 Hb_000789_140 0.121378236 - - PREDICTED: uncharacterized protein LOC105650390, partial [Jatropha curcas]
7 Hb_001629_040 0.1431435649 - - hypothetical protein POPTR_0001s41630g [Populus trichocarpa]
8 Hb_000155_240 0.1648835851 - - PREDICTED: uncharacterized protein LOC104888642 [Beta vulgaris subsp. vulgaris]
9 Hb_038508_010 0.2034343041 - - PREDICTED: uncharacterized protein LOC105638675 [Jatropha curcas]
10 Hb_128193_010 0.2223168471 - - PREDICTED: uncharacterized protein LOC103699534, partial [Phoenix dactylifera]
11 Hb_003567_020 0.2273423995 - - conserved hypothetical protein [Ricinus communis]
12 Hb_017604_030 0.2438924824 - - -
13 Hb_006474_010 0.2569441544 - - hypothetical protein VITISV_032357 [Vitis vinifera]
14 Hb_000089_050 0.2603995429 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
15 Hb_180367_010 0.2658343786 - - PREDICTED: uncharacterized protein LOC105794100 [Gossypium raimondii]
16 Hb_012807_090 0.2664222079 - - PREDICTED: uncharacterized protein LOC100267173 [Vitis vinifera]
17 Hb_004951_050 0.2671554899 - - conserved hypothetical protein [Ricinus communis]
18 Hb_014929_010 0.2675878662 - - -
19 Hb_000143_070 0.2687019697 - - -
20 Hb_000300_460 0.2697762828 - - Mavicyanin, putative [Ricinus communis]

Gene co-expression network

sample Hb_009152_030 Hb_009152_030 Hb_031866_030 Hb_031866_030 Hb_009152_030--Hb_031866_030 Hb_002060_040 Hb_002060_040 Hb_009152_030--Hb_002060_040 Hb_033066_030 Hb_033066_030 Hb_009152_030--Hb_033066_030 Hb_000009_010 Hb_000009_010 Hb_009152_030--Hb_000009_010 Hb_000789_140 Hb_000789_140 Hb_009152_030--Hb_000789_140 Hb_001629_040 Hb_001629_040 Hb_009152_030--Hb_001629_040 Hb_031866_030--Hb_002060_040 Hb_031866_030--Hb_033066_030 Hb_031866_030--Hb_000009_010 Hb_031866_030--Hb_001629_040 Hb_031866_030--Hb_000789_140 Hb_002060_040--Hb_033066_030 Hb_002060_040--Hb_000009_010 Hb_002060_040--Hb_001629_040 Hb_002060_040--Hb_000789_140 Hb_033066_030--Hb_000009_010 Hb_033066_030--Hb_001629_040 Hb_033066_030--Hb_000789_140 Hb_000009_010--Hb_001629_040 Hb_128193_010 Hb_128193_010 Hb_000009_010--Hb_128193_010 Hb_000155_240 Hb_000155_240 Hb_000789_140--Hb_000155_240 Hb_038508_010 Hb_038508_010 Hb_000789_140--Hb_038508_010 Hb_001629_040--Hb_128193_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0517067 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0304282 0.144933

CAGE analysis