Hb_003927_060

Information

Type -
Description -
Location Contig3927: 39650-44674
Sequence    

Annotation

kegg
ID cic:CICLE_v10030301mg
description hypothetical protein
nr
ID KDP44169.1
description hypothetical protein JCGZ_05636 [Jatropha curcas]
swissprot
ID C0LGP2
description Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1
trembl
ID A0A067LIT9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05636 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003927_060 0.0 - - hypothetical protein JCGZ_05636 [Jatropha curcas]
2 Hb_003605_010 0.2404716261 - - -
3 Hb_000976_200 0.2501172332 - - -
4 Hb_007064_030 0.2656044187 - - polyprotein [Citrus endogenous pararetrovirus]
5 Hb_083663_010 0.3316419227 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
6 Hb_095449_010 0.3321829492 - - PREDICTED: low-temperature-induced 65 kDa protein-like [Jatropha curcas]
7 Hb_126044_010 0.339014366 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
8 Hb_032634_010 0.3419577917 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
9 Hb_000340_540 0.3421929998 - - PREDICTED: peroxidase 39-like [Jatropha curcas]
10 Hb_004511_060 0.3483730205 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103328625 [Prunus mume]
11 Hb_162086_010 0.353195532 - - PREDICTED: uncharacterized protein LOC105634453 [Jatropha curcas]
12 Hb_111854_010 0.3552001784 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
13 Hb_173121_010 0.3578574369 - - -
14 Hb_015778_020 0.3608008623 - - Putative methyltransferase family protein [Solanum demissum]
15 Hb_113541_010 0.3629597055 - - PREDICTED: uncharacterized protein LOC105762713 [Gossypium raimondii]
16 Hb_010452_010 0.376839646 - - PREDICTED: uncharacterized protein LOC104232369 [Nicotiana sylvestris]
17 Hb_002498_150 0.377619992 - - conserved hypothetical protein [Ricinus communis]
18 Hb_019617_010 0.3799481395 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
19 Hb_093912_010 0.3804315455 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
20 Hb_011280_020 0.3827514383 - - polyprotein [Oryza australiensis]

Gene co-expression network

sample Hb_003927_060 Hb_003927_060 Hb_003605_010 Hb_003605_010 Hb_003927_060--Hb_003605_010 Hb_000976_200 Hb_000976_200 Hb_003927_060--Hb_000976_200 Hb_007064_030 Hb_007064_030 Hb_003927_060--Hb_007064_030 Hb_083663_010 Hb_083663_010 Hb_003927_060--Hb_083663_010 Hb_095449_010 Hb_095449_010 Hb_003927_060--Hb_095449_010 Hb_126044_010 Hb_126044_010 Hb_003927_060--Hb_126044_010 Hb_173121_010 Hb_173121_010 Hb_003605_010--Hb_173121_010 Hb_019617_010 Hb_019617_010 Hb_003605_010--Hb_019617_010 Hb_067730_010 Hb_067730_010 Hb_003605_010--Hb_067730_010 Hb_002996_020 Hb_002996_020 Hb_003605_010--Hb_002996_020 Hb_111854_010 Hb_111854_010 Hb_003605_010--Hb_111854_010 Hb_004511_060 Hb_004511_060 Hb_000976_200--Hb_004511_060 Hb_113541_010 Hb_113541_010 Hb_000976_200--Hb_113541_010 Hb_000340_540 Hb_000340_540 Hb_000976_200--Hb_000340_540 Hb_000976_200--Hb_111854_010 Hb_162086_010 Hb_162086_010 Hb_000976_200--Hb_162086_010 Hb_007064_030--Hb_126044_010 Hb_071130_040 Hb_071130_040 Hb_007064_030--Hb_071130_040 Hb_004656_080 Hb_004656_080 Hb_007064_030--Hb_004656_080 Hb_057207_010 Hb_057207_010 Hb_007064_030--Hb_057207_010 Hb_001335_050 Hb_001335_050 Hb_007064_030--Hb_001335_050 Hb_015778_020 Hb_015778_020 Hb_083663_010--Hb_015778_020 Hb_011280_020 Hb_011280_020 Hb_083663_010--Hb_011280_020 Hb_011344_150 Hb_011344_150 Hb_083663_010--Hb_011344_150 Hb_010452_010 Hb_010452_010 Hb_083663_010--Hb_010452_010 Hb_002520_010 Hb_002520_010 Hb_083663_010--Hb_002520_010 Hb_000505_120 Hb_000505_120 Hb_083663_010--Hb_000505_120 Hb_005474_050 Hb_005474_050 Hb_095449_010--Hb_005474_050 Hb_002498_150 Hb_002498_150 Hb_095449_010--Hb_002498_150 Hb_002092_140 Hb_002092_140 Hb_095449_010--Hb_002092_140 Hb_166828_010 Hb_166828_010 Hb_095449_010--Hb_166828_010 Hb_000320_170 Hb_000320_170 Hb_095449_010--Hb_000320_170 Hb_080873_010 Hb_080873_010 Hb_095449_010--Hb_080873_010 Hb_126044_010--Hb_057207_010 Hb_126044_010--Hb_071130_040 Hb_124621_010 Hb_124621_010 Hb_126044_010--Hb_124621_010 Hb_126044_010--Hb_001335_050 Hb_006212_030 Hb_006212_030 Hb_126044_010--Hb_006212_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0131961 0.0327609 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0236437 0 0 0.0495317

CAGE analysis