Hb_057207_010

Information

Type -
Description -
Location Contig57207: 93-560
Sequence    

Annotation

kegg
ID mdm:103454944
description uncharacterized LOC103454944
nr
ID KHG14037.1
description hypothetical protein F383_17010 [Gossypium arboreum]
swissprot
ID -
description -
trembl
ID A0A0B0NN01
description Uncharacterized protein OS=Gossypium arboreum GN=F383_17010 PE=4 SV=1
Gene Ontology
ID GO:0016740
description phosphate import atp-binding 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_057207_010 0.0 - - hypothetical protein F383_17010 [Gossypium arboreum]
2 Hb_126044_010 0.2280137441 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
3 Hb_001335_050 0.2594781269 - - -
4 Hb_107221_010 0.2770455755 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
5 Hb_005654_010 0.2805895693 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
6 Hb_007064_030 0.2838911764 - - polyprotein [Citrus endogenous pararetrovirus]
7 Hb_001623_600 0.284247163 - - PREDICTED: uncharacterized protein LOC104748784 [Camelina sativa]
8 Hb_001233_040 0.2904983457 - - PREDICTED: uncharacterized protein LOC105775263 [Gossypium raimondii]
9 Hb_003813_160 0.2956856332 - - -
10 Hb_071130_040 0.3057842275 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000375_180 0.3253831245 - - PREDICTED: uncharacterized protein LOC104593656 [Nelumbo nucifera]
12 Hb_122556_010 0.3255062551 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
13 Hb_006452_230 0.3261518443 - - PREDICTED: uncharacterized protein LOC105635044 [Jatropha curcas]
14 Hb_035935_010 0.3281056242 - - PREDICTED: uncharacterized protein LOC104234330 [Nicotiana sylvestris]
15 Hb_124621_010 0.3308206395 - - hypothetical protein L484_019698 [Morus notabilis]
16 Hb_011724_030 0.3310188152 - - Organic cation transporter, putative [Ricinus communis]
17 Hb_049717_010 0.3350630048 - - PREDICTED: uncharacterized protein LOC105800955 [Gossypium raimondii]
18 Hb_000003_360 0.3415965996 - - Putative inactive purple acid phosphatase 27 [Glycine soja]
19 Hb_006212_030 0.3439683851 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
20 Hb_030131_010 0.3443118862 - - PREDICTED: probable acyl-activating enzyme 1, peroxisomal, partial [Jatropha curcas]

Gene co-expression network

sample Hb_057207_010 Hb_057207_010 Hb_126044_010 Hb_126044_010 Hb_057207_010--Hb_126044_010 Hb_001335_050 Hb_001335_050 Hb_057207_010--Hb_001335_050 Hb_107221_010 Hb_107221_010 Hb_057207_010--Hb_107221_010 Hb_005654_010 Hb_005654_010 Hb_057207_010--Hb_005654_010 Hb_007064_030 Hb_007064_030 Hb_057207_010--Hb_007064_030 Hb_001623_600 Hb_001623_600 Hb_057207_010--Hb_001623_600 Hb_126044_010--Hb_007064_030 Hb_071130_040 Hb_071130_040 Hb_126044_010--Hb_071130_040 Hb_124621_010 Hb_124621_010 Hb_126044_010--Hb_124621_010 Hb_126044_010--Hb_001335_050 Hb_006212_030 Hb_006212_030 Hb_126044_010--Hb_006212_030 Hb_001335_050--Hb_107221_010 Hb_001335_050--Hb_005654_010 Hb_001335_050--Hb_071130_040 Hb_000375_180 Hb_000375_180 Hb_001335_050--Hb_000375_180 Hb_001335_050--Hb_007064_030 Hb_107221_010--Hb_071130_040 Hb_107221_010--Hb_124621_010 Hb_107221_010--Hb_005654_010 Hb_178654_020 Hb_178654_020 Hb_107221_010--Hb_178654_020 Hb_005654_010--Hb_000375_180 Hb_012938_010 Hb_012938_010 Hb_005654_010--Hb_012938_010 Hb_005654_010--Hb_071130_040 Hb_104721_010 Hb_104721_010 Hb_005654_010--Hb_104721_010 Hb_007064_030--Hb_071130_040 Hb_004656_080 Hb_004656_080 Hb_007064_030--Hb_004656_080 Hb_003927_060 Hb_003927_060 Hb_007064_030--Hb_003927_060 Hb_000445_200 Hb_000445_200 Hb_001623_600--Hb_000445_200 Hb_000387_090 Hb_000387_090 Hb_001623_600--Hb_000387_090 Hb_001623_600--Hb_104721_010 Hb_003487_010 Hb_003487_010 Hb_001623_600--Hb_003487_010 Hb_002874_040 Hb_002874_040 Hb_001623_600--Hb_002874_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0638251 0.0550479 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.149954 0.117792 0 0.0493028 0.216782

CAGE analysis