Hb_124621_010

Information

Type -
Description -
Location Contig124621: 15-639
Sequence    

Annotation

kegg
ID pda:103699058
description uncharacterized LOC103699058
nr
ID XP_010087492.1
description hypothetical protein L484_019698 [Morus notabilis]
swissprot
ID -
description -
trembl
ID W9QKF9
description Uncharacterized protein OS=Morus notabilis GN=L484_019698 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_124621_010 0.0 - - hypothetical protein L484_019698 [Morus notabilis]
2 Hb_071130_040 0.1576879165 - - conserved hypothetical protein [Ricinus communis]
3 Hb_094852_010 0.2104536463 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
4 Hb_065858_010 0.2139004751 - - PREDICTED: uncharacterized protein LOC104227769, partial [Nicotiana sylvestris]
5 Hb_012938_010 0.2292770523 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
6 Hb_178654_020 0.2330343708 - - PREDICTED: uncharacterized protein LOC105638675 [Jatropha curcas]
7 Hb_031474_030 0.2416292697 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
8 Hb_107221_010 0.2416367871 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
9 Hb_156924_020 0.2484401532 - - PREDICTED: uncharacterized protein LOC105644346 [Jatropha curcas]
10 Hb_000757_090 0.266878011 - - SPla/RYanodine receptor domain-containing protein isoform 3 [Theobroma cacao]
11 Hb_011724_030 0.2895673549 - - Organic cation transporter, putative [Ricinus communis]
12 Hb_001335_050 0.290749999 - - -
13 Hb_005654_010 0.3082274438 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
14 Hb_126044_010 0.3172302915 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
15 Hb_000375_180 0.3180472949 - - PREDICTED: uncharacterized protein LOC104593656 [Nelumbo nucifera]
16 Hb_057207_010 0.3308206395 - - hypothetical protein F383_17010 [Gossypium arboreum]
17 Hb_180455_010 0.3355928904 - - PREDICTED: uncharacterized protein LOC105778857 [Gossypium raimondii]
18 Hb_004656_080 0.3383960841 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
19 Hb_001344_030 0.3394678863 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
20 Hb_005615_060 0.3411993656 - - PREDICTED: uncharacterized protein LOC105636752 [Jatropha curcas]

Gene co-expression network

sample Hb_124621_010 Hb_124621_010 Hb_071130_040 Hb_071130_040 Hb_124621_010--Hb_071130_040 Hb_094852_010 Hb_094852_010 Hb_124621_010--Hb_094852_010 Hb_065858_010 Hb_065858_010 Hb_124621_010--Hb_065858_010 Hb_012938_010 Hb_012938_010 Hb_124621_010--Hb_012938_010 Hb_178654_020 Hb_178654_020 Hb_124621_010--Hb_178654_020 Hb_031474_030 Hb_031474_030 Hb_124621_010--Hb_031474_030 Hb_071130_040--Hb_012938_010 Hb_004656_080 Hb_004656_080 Hb_071130_040--Hb_004656_080 Hb_001335_050 Hb_001335_050 Hb_071130_040--Hb_001335_050 Hb_107221_010 Hb_107221_010 Hb_071130_040--Hb_107221_010 Hb_005654_010 Hb_005654_010 Hb_071130_040--Hb_005654_010 Hb_156924_020 Hb_156924_020 Hb_094852_010--Hb_156924_020 Hb_094852_010--Hb_178654_020 Hb_000757_090 Hb_000757_090 Hb_094852_010--Hb_000757_090 Hb_094852_010--Hb_065858_010 Hb_001344_030 Hb_001344_030 Hb_094852_010--Hb_001344_030 Hb_065858_010--Hb_178654_020 Hb_065858_010--Hb_156924_020 Hb_005615_060 Hb_005615_060 Hb_065858_010--Hb_005615_060 Hb_065858_010--Hb_000757_090 Hb_012938_010--Hb_005654_010 Hb_000375_180 Hb_000375_180 Hb_012938_010--Hb_000375_180 Hb_002811_340 Hb_002811_340 Hb_012938_010--Hb_002811_340 Hb_000016_120 Hb_000016_120 Hb_012938_010--Hb_000016_120 Hb_012938_010--Hb_156924_020 Hb_178654_020--Hb_156924_020 Hb_178654_020--Hb_000757_090 Hb_178654_020--Hb_012938_010 Hb_011724_030 Hb_011724_030 Hb_031474_030--Hb_011724_030 Hb_027751_010 Hb_027751_010 Hb_031474_030--Hb_027751_010 Hb_031474_030--Hb_107221_010 Hb_031474_030--Hb_005615_060 Hb_031474_030--Hb_065858_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0449796 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.245801 0.0965631 0 0 0.182619

CAGE analysis