Hb_031474_030

Information

Type -
Description -
Location Contig31474: 19697-25887
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa023432mg
description hypothetical protein
nr
ID XP_012068505.1
description PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID M5WQG1
description Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa023432mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_031474_030 0.0 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
2 Hb_011724_030 0.2045355282 - - Organic cation transporter, putative [Ricinus communis]
3 Hb_124621_010 0.2416292697 - - hypothetical protein L484_019698 [Morus notabilis]
4 Hb_027751_010 0.2628134084 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
5 Hb_107221_010 0.306586229 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
6 Hb_005615_060 0.3093750658 - - PREDICTED: uncharacterized protein LOC105636752 [Jatropha curcas]
7 Hb_065858_010 0.3111176739 - - PREDICTED: uncharacterized protein LOC104227769, partial [Nicotiana sylvestris]
8 Hb_015807_110 0.3252895756 - - thioredoxin h [Hevea brasiliensis]
9 Hb_002217_520 0.3338114232 - - PREDICTED: probable protein phosphatase 2C 42 isoform X3 [Populus euphratica]
10 Hb_071130_040 0.3339407807 - - conserved hypothetical protein [Ricinus communis]
11 Hb_006351_070 0.3370595838 - - heat-shock protein, putative [Ricinus communis]
12 Hb_062785_010 0.3371793208 - - Organic cation transporter, putative [Ricinus communis]
13 Hb_001335_050 0.3528682091 - - -
14 Hb_094852_010 0.3555314441 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
15 Hb_000449_060 0.3569230433 - - -
16 Hb_002094_070 0.3597366696 - - Organic cation transporter, putative [Ricinus communis]
17 Hb_001022_060 0.3608611524 - - PREDICTED: alpha/beta hydrolase domain-containing protein 11 [Jatropha curcas]
18 Hb_057207_010 0.3626728537 - - hypothetical protein F383_17010 [Gossypium arboreum]
19 Hb_001366_070 0.3675475149 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 4-like isoform X2 [Jatropha curcas]
20 Hb_178654_020 0.3728012909 - - PREDICTED: uncharacterized protein LOC105638675 [Jatropha curcas]

Gene co-expression network

sample Hb_031474_030 Hb_031474_030 Hb_011724_030 Hb_011724_030 Hb_031474_030--Hb_011724_030 Hb_124621_010 Hb_124621_010 Hb_031474_030--Hb_124621_010 Hb_027751_010 Hb_027751_010 Hb_031474_030--Hb_027751_010 Hb_107221_010 Hb_107221_010 Hb_031474_030--Hb_107221_010 Hb_005615_060 Hb_005615_060 Hb_031474_030--Hb_005615_060 Hb_065858_010 Hb_065858_010 Hb_031474_030--Hb_065858_010 Hb_062785_010 Hb_062785_010 Hb_011724_030--Hb_062785_010 Hb_002094_070 Hb_002094_070 Hb_011724_030--Hb_002094_070 Hb_002217_520 Hb_002217_520 Hb_011724_030--Hb_002217_520 Hb_001117_120 Hb_001117_120 Hb_011724_030--Hb_001117_120 Hb_000331_520 Hb_000331_520 Hb_011724_030--Hb_000331_520 Hb_071130_040 Hb_071130_040 Hb_124621_010--Hb_071130_040 Hb_094852_010 Hb_094852_010 Hb_124621_010--Hb_094852_010 Hb_124621_010--Hb_065858_010 Hb_012938_010 Hb_012938_010 Hb_124621_010--Hb_012938_010 Hb_178654_020 Hb_178654_020 Hb_124621_010--Hb_178654_020 Hb_003487_010 Hb_003487_010 Hb_027751_010--Hb_003487_010 Hb_155403_010 Hb_155403_010 Hb_027751_010--Hb_155403_010 Hb_180455_010 Hb_180455_010 Hb_027751_010--Hb_180455_010 Hb_153051_010 Hb_153051_010 Hb_027751_010--Hb_153051_010 Hb_108768_010 Hb_108768_010 Hb_027751_010--Hb_108768_010 Hb_001335_050 Hb_001335_050 Hb_107221_010--Hb_001335_050 Hb_107221_010--Hb_071130_040 Hb_107221_010--Hb_124621_010 Hb_005654_010 Hb_005654_010 Hb_107221_010--Hb_005654_010 Hb_057207_010 Hb_057207_010 Hb_107221_010--Hb_057207_010 Hb_107221_010--Hb_178654_020 Hb_005615_060--Hb_065858_010 Hb_001936_170 Hb_001936_170 Hb_005615_060--Hb_001936_170 Hb_000449_060 Hb_000449_060 Hb_005615_060--Hb_000449_060 Hb_015807_110 Hb_015807_110 Hb_005615_060--Hb_015807_110 Hb_005615_060--Hb_011724_030 Hb_065858_010--Hb_094852_010 Hb_065858_010--Hb_178654_020 Hb_156924_020 Hb_156924_020 Hb_065858_010--Hb_156924_020 Hb_000757_090 Hb_000757_090 Hb_065858_010--Hb_000757_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.00657301 0.00311001 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.036233 0.00712875 0 0.00282161 0.015309

CAGE analysis