Hb_153051_010

Information

Type -
Description -
Location Contig153051: 12-311
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_153051_010 0.0 - - -
2 Hb_008879_010 0.3111510327 - - Beta-ureidopropionase, putative [Ricinus communis]
3 Hb_027751_010 0.3124992448 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
4 Hb_002325_080 0.3299203604 - - -
5 Hb_041813_020 0.3351010331 - - ATP synthase epsilon subunit [Grubbia rosmarinifolia]
6 Hb_180455_010 0.3353928335 - - PREDICTED: uncharacterized protein LOC105778857 [Gossypium raimondii]
7 Hb_001595_060 0.3360853223 - - hypothetical protein L484_001429 [Morus notabilis]
8 Hb_006267_050 0.3362718539 - - hypothetical protein B456_002G103400 [Gossypium raimondii]
9 Hb_162633_010 0.3375940503 - - hypothetical protein POPTR_0011s02600g [Populus trichocarpa]
10 Hb_011206_030 0.3382708233 - - PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Jatropha curcas]
11 Hb_048953_010 0.3382708233 - - PREDICTED: uncharacterized protein LOC105775428 [Gossypium raimondii]
12 Hb_004772_010 0.3406025345 - - PREDICTED: uncharacterized protein LOC104647507 [Solanum lycopersicum]
13 Hb_003504_050 0.3438592528 - - hypothetical protein JCGZ_23540 [Jatropha curcas]
14 Hb_024446_010 0.3488660097 - - PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]
15 Hb_064445_030 0.3492312404 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
16 Hb_003828_010 0.3493159181 - - PREDICTED: uncharacterized protein LOC104219776 [Nicotiana sylvestris]
17 Hb_177166_010 0.3497074554 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
18 Hb_006094_010 0.3503701693 - - PREDICTED: uncharacterized protein LOC104227769, partial [Nicotiana sylvestris]
19 Hb_005781_010 0.3507114315 - - PREDICTED: probable terpene synthase 6 [Jatropha curcas]
20 Hb_000485_060 0.3514457005 - - PREDICTED: uncharacterized protein LOC105641351 [Jatropha curcas]

Gene co-expression network

sample Hb_153051_010 Hb_153051_010 Hb_008879_010 Hb_008879_010 Hb_153051_010--Hb_008879_010 Hb_027751_010 Hb_027751_010 Hb_153051_010--Hb_027751_010 Hb_002325_080 Hb_002325_080 Hb_153051_010--Hb_002325_080 Hb_041813_020 Hb_041813_020 Hb_153051_010--Hb_041813_020 Hb_180455_010 Hb_180455_010 Hb_153051_010--Hb_180455_010 Hb_001595_060 Hb_001595_060 Hb_153051_010--Hb_001595_060 Hb_008879_010--Hb_002325_080 Hb_008879_010--Hb_041813_020 Hb_008879_010--Hb_001595_060 Hb_006267_050 Hb_006267_050 Hb_008879_010--Hb_006267_050 Hb_011206_030 Hb_011206_030 Hb_008879_010--Hb_011206_030 Hb_048953_010 Hb_048953_010 Hb_008879_010--Hb_048953_010 Hb_003487_010 Hb_003487_010 Hb_027751_010--Hb_003487_010 Hb_031474_030 Hb_031474_030 Hb_027751_010--Hb_031474_030 Hb_155403_010 Hb_155403_010 Hb_027751_010--Hb_155403_010 Hb_027751_010--Hb_180455_010 Hb_108768_010 Hb_108768_010 Hb_027751_010--Hb_108768_010 Hb_002325_080--Hb_041813_020 Hb_002325_080--Hb_001595_060 Hb_002325_080--Hb_006267_050 Hb_002325_080--Hb_011206_030 Hb_002325_080--Hb_048953_010 Hb_004772_010 Hb_004772_010 Hb_002325_080--Hb_004772_010 Hb_041813_020--Hb_001595_060 Hb_041813_020--Hb_006267_050 Hb_041813_020--Hb_011206_030 Hb_041813_020--Hb_048953_010 Hb_041813_020--Hb_004772_010 Hb_024446_010 Hb_024446_010 Hb_180455_010--Hb_024446_010 Hb_064445_030 Hb_064445_030 Hb_180455_010--Hb_064445_030 Hb_003828_010 Hb_003828_010 Hb_180455_010--Hb_003828_010 Hb_177166_010 Hb_177166_010 Hb_180455_010--Hb_177166_010 Hb_006094_010 Hb_006094_010 Hb_180455_010--Hb_006094_010 Hb_005781_010 Hb_005781_010 Hb_180455_010--Hb_005781_010 Hb_001595_060--Hb_006267_050 Hb_001595_060--Hb_011206_030 Hb_001595_060--Hb_048953_010 Hb_001595_060--Hb_004772_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.147394 0.145075 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.87147 0 0.419256 0 1.3657

CAGE analysis