Hb_001595_060

Information

Type -
Description -
Location Contig1595: 108364-108765
Sequence    

Annotation

kegg
ID sly:104647535
description uncharacterized LOC104647535
nr
ID XP_010100175.1
description hypothetical protein L484_001429 [Morus notabilis]
swissprot
ID -
description -
trembl
ID W9RK74
description Uncharacterized protein OS=Morus notabilis GN=L484_001429 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001595_060 0.0 - - hypothetical protein L484_001429 [Morus notabilis]
2 Hb_006267_050 0.000517915 - - hypothetical protein B456_002G103400 [Gossypium raimondii]
3 Hb_041813_020 0.0027611789 - - ATP synthase epsilon subunit [Grubbia rosmarinifolia]
4 Hb_011206_030 0.005967702 - - PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Jatropha curcas]
5 Hb_048953_010 0.005967702 - - PREDICTED: uncharacterized protein LOC105775428 [Gossypium raimondii]
6 Hb_004772_010 0.0121116349 - - PREDICTED: uncharacterized protein LOC104647507 [Solanum lycopersicum]
7 Hb_002325_080 0.0181985791 - - -
8 Hb_003504_050 0.020357969 - - hypothetical protein JCGZ_23540 [Jatropha curcas]
9 Hb_024446_010 0.0323945799 - - PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]
10 Hb_064445_030 0.0332459915 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
11 Hb_003828_010 0.0334429111 - - PREDICTED: uncharacterized protein LOC104219776 [Nicotiana sylvestris]
12 Hb_177166_010 0.0343511281 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
13 Hb_006094_010 0.0358798456 - - PREDICTED: uncharacterized protein LOC104227769, partial [Nicotiana sylvestris]
14 Hb_005781_010 0.0366629507 - - PREDICTED: probable terpene synthase 6 [Jatropha curcas]
15 Hb_000485_060 0.0383386603 - - PREDICTED: uncharacterized protein LOC105641351 [Jatropha curcas]
16 Hb_002478_050 0.0392491139 - - K(+)/H(+) antiporter, putative [Ricinus communis]
17 Hb_001844_010 0.0407924307 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
18 Hb_076836_010 0.0411910315 - - PREDICTED: uncharacterized protein LOC104801925 [Tarenaya hassleriana]
19 Hb_008879_010 0.118325061 - - Beta-ureidopropionase, putative [Ricinus communis]
20 Hb_003607_100 0.1655477225 - - PREDICTED: zinc finger protein 3 [Jatropha curcas]

Gene co-expression network

sample Hb_001595_060 Hb_001595_060 Hb_006267_050 Hb_006267_050 Hb_001595_060--Hb_006267_050 Hb_041813_020 Hb_041813_020 Hb_001595_060--Hb_041813_020 Hb_011206_030 Hb_011206_030 Hb_001595_060--Hb_011206_030 Hb_048953_010 Hb_048953_010 Hb_001595_060--Hb_048953_010 Hb_004772_010 Hb_004772_010 Hb_001595_060--Hb_004772_010 Hb_002325_080 Hb_002325_080 Hb_001595_060--Hb_002325_080 Hb_006267_050--Hb_041813_020 Hb_006267_050--Hb_011206_030 Hb_006267_050--Hb_048953_010 Hb_006267_050--Hb_004772_010 Hb_006267_050--Hb_002325_080 Hb_041813_020--Hb_011206_030 Hb_041813_020--Hb_048953_010 Hb_041813_020--Hb_004772_010 Hb_041813_020--Hb_002325_080 Hb_011206_030--Hb_048953_010 Hb_011206_030--Hb_004772_010 Hb_003504_050 Hb_003504_050 Hb_011206_030--Hb_003504_050 Hb_011206_030--Hb_048953_010 Hb_011206_030--Hb_004772_010 Hb_011206_030--Hb_003504_050 Hb_004772_010--Hb_048953_010 Hb_004772_010--Hb_003504_050 Hb_002325_080--Hb_011206_030 Hb_002325_080--Hb_048953_010 Hb_002325_080--Hb_004772_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.197382 0 0 0 0.272949

CAGE analysis