Hb_002325_080

Information

Type -
Description -
Location Contig2325: 82171-85482
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002325_080 0.0 - - -
2 Hb_041813_020 0.0154376805 - - ATP synthase epsilon subunit [Grubbia rosmarinifolia]
3 Hb_001595_060 0.0181985791 - - hypothetical protein L484_001429 [Morus notabilis]
4 Hb_006267_050 0.0187164302 - - hypothetical protein B456_002G103400 [Gossypium raimondii]
5 Hb_011206_030 0.024165329 - - PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Jatropha curcas]
6 Hb_048953_010 0.024165329 - - PREDICTED: uncharacterized protein LOC105775428 [Gossypium raimondii]
7 Hb_004772_010 0.0303077833 - - PREDICTED: uncharacterized protein LOC104647507 [Solanum lycopersicum]
8 Hb_003504_050 0.03855133 - - hypothetical protein JCGZ_23540 [Jatropha curcas]
9 Hb_024446_010 0.0505821964 - - PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]
10 Hb_064445_030 0.0514331254 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
11 Hb_003828_010 0.0516299319 - - PREDICTED: uncharacterized protein LOC104219776 [Nicotiana sylvestris]
12 Hb_177166_010 0.0525376204 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
13 Hb_006094_010 0.0540654223 - - PREDICTED: uncharacterized protein LOC104227769, partial [Nicotiana sylvestris]
14 Hb_005781_010 0.0548480455 - - PREDICTED: probable terpene synthase 6 [Jatropha curcas]
15 Hb_000485_060 0.056522695 - - PREDICTED: uncharacterized protein LOC105641351 [Jatropha curcas]
16 Hb_002478_050 0.0574325559 - - K(+)/H(+) antiporter, putative [Ricinus communis]
17 Hb_001844_010 0.0589748414 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
18 Hb_076836_010 0.0593731703 - - PREDICTED: uncharacterized protein LOC104801925 [Tarenaya hassleriana]
19 Hb_008879_010 0.1002017181 - - Beta-ureidopropionase, putative [Ricinus communis]
20 Hb_003607_100 0.1835236773 - - PREDICTED: zinc finger protein 3 [Jatropha curcas]

Gene co-expression network

sample Hb_002325_080 Hb_002325_080 Hb_041813_020 Hb_041813_020 Hb_002325_080--Hb_041813_020 Hb_001595_060 Hb_001595_060 Hb_002325_080--Hb_001595_060 Hb_006267_050 Hb_006267_050 Hb_002325_080--Hb_006267_050 Hb_011206_030 Hb_011206_030 Hb_002325_080--Hb_011206_030 Hb_048953_010 Hb_048953_010 Hb_002325_080--Hb_048953_010 Hb_004772_010 Hb_004772_010 Hb_002325_080--Hb_004772_010 Hb_041813_020--Hb_001595_060 Hb_041813_020--Hb_006267_050 Hb_041813_020--Hb_011206_030 Hb_041813_020--Hb_048953_010 Hb_041813_020--Hb_004772_010 Hb_001595_060--Hb_006267_050 Hb_001595_060--Hb_011206_030 Hb_001595_060--Hb_048953_010 Hb_001595_060--Hb_004772_010 Hb_006267_050--Hb_011206_030 Hb_006267_050--Hb_048953_010 Hb_006267_050--Hb_004772_010 Hb_011206_030--Hb_048953_010 Hb_011206_030--Hb_004772_010 Hb_003504_050 Hb_003504_050 Hb_011206_030--Hb_003504_050 Hb_011206_030--Hb_048953_010 Hb_011206_030--Hb_004772_010 Hb_011206_030--Hb_003504_050 Hb_004772_010--Hb_048953_010 Hb_004772_010--Hb_003504_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.308474 0 0 0 0.391199

CAGE analysis