Hb_094852_010

Information

Type -
Description -
Location Contig94852: 2142-2696
Sequence    

Annotation

kegg
ID cmo:103496653
description uncharacterized LOC103496653
nr
ID XP_012092566.1
description PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A0B0MQD4
description Phosphate import ATP-binding PstB 2 OS=Gossypium arboreum GN=F383_30012 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_094852_010 0.0 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
2 Hb_156924_020 0.0867832249 - - PREDICTED: uncharacterized protein LOC105644346 [Jatropha curcas]
3 Hb_178654_020 0.1015009723 - - PREDICTED: uncharacterized protein LOC105638675 [Jatropha curcas]
4 Hb_000757_090 0.1188676453 - - SPla/RYanodine receptor domain-containing protein isoform 3 [Theobroma cacao]
5 Hb_065858_010 0.1339806436 - - PREDICTED: uncharacterized protein LOC104227769, partial [Nicotiana sylvestris]
6 Hb_124621_010 0.2104536463 - - hypothetical protein L484_019698 [Morus notabilis]
7 Hb_001344_030 0.2273769901 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
8 Hb_012938_010 0.2472264513 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
9 Hb_186054_010 0.2555312362 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
10 Hb_071130_040 0.2594810183 - - conserved hypothetical protein [Ricinus communis]
11 Hb_002811_340 0.2901972503 - - PREDICTED: ammonium transporter 3 member 2-like [Populus euphratica]
12 Hb_001519_020 0.3111822308 - - hypothetical protein JCGZ_09913 [Jatropha curcas]
13 Hb_003020_290 0.3210209721 - - hypothetical protein CICLE_v10029104mg [Citrus clementina]
14 Hb_005615_060 0.3236005705 - - PREDICTED: uncharacterized protein LOC105636752 [Jatropha curcas]
15 Hb_107221_010 0.3242400681 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
16 Hb_104721_010 0.3253968348 - - PREDICTED: uncharacterized protein LOC105763691 [Gossypium raimondii]
17 Hb_158235_010 0.3315532782 - - PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
18 Hb_005654_010 0.3316482365 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
19 Hb_007157_010 0.3374687213 - - -
20 Hb_008879_010 0.3386294777 - - Beta-ureidopropionase, putative [Ricinus communis]

Gene co-expression network

sample Hb_094852_010 Hb_094852_010 Hb_156924_020 Hb_156924_020 Hb_094852_010--Hb_156924_020 Hb_178654_020 Hb_178654_020 Hb_094852_010--Hb_178654_020 Hb_000757_090 Hb_000757_090 Hb_094852_010--Hb_000757_090 Hb_065858_010 Hb_065858_010 Hb_094852_010--Hb_065858_010 Hb_124621_010 Hb_124621_010 Hb_094852_010--Hb_124621_010 Hb_001344_030 Hb_001344_030 Hb_094852_010--Hb_001344_030 Hb_156924_020--Hb_000757_090 Hb_156924_020--Hb_178654_020 Hb_156924_020--Hb_001344_030 Hb_186054_010 Hb_186054_010 Hb_156924_020--Hb_186054_010 Hb_156924_020--Hb_065858_010 Hb_178654_020--Hb_000757_090 Hb_178654_020--Hb_065858_010 Hb_178654_020--Hb_124621_010 Hb_012938_010 Hb_012938_010 Hb_178654_020--Hb_012938_010 Hb_000757_090--Hb_001344_030 Hb_000757_090--Hb_186054_010 Hb_000757_090--Hb_012938_010 Hb_065858_010--Hb_124621_010 Hb_005615_060 Hb_005615_060 Hb_065858_010--Hb_005615_060 Hb_065858_010--Hb_000757_090 Hb_071130_040 Hb_071130_040 Hb_124621_010--Hb_071130_040 Hb_124621_010--Hb_012938_010 Hb_031474_030 Hb_031474_030 Hb_124621_010--Hb_031474_030 Hb_001344_030--Hb_186054_010 Hb_158235_010 Hb_158235_010 Hb_001344_030--Hb_158235_010 Hb_104721_010 Hb_104721_010 Hb_001344_030--Hb_104721_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.340957 0.178612 0 0 0.341052

CAGE analysis