Hb_158235_010

Information

Type -
Description -
Location Contig158235: 59-601
Sequence    

Annotation

kegg
ID bvg:104886268
description uncharacterized LOC104886268
nr
ID XP_010521027.1
description PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
swissprot
ID -
description -
trembl
ID A0A072ULC5
description Uncharacterized protein OS=Medicago truncatula GN=MTR_6g065930 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_158235_010 0.0 - - PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
2 Hb_001519_020 0.1599499529 - - hypothetical protein JCGZ_09913 [Jatropha curcas]
3 Hb_001344_030 0.1933139457 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
4 Hb_003020_290 0.2114626689 - - hypothetical protein CICLE_v10029104mg [Citrus clementina]
5 Hb_013253_030 0.2115744634 - - PREDICTED: protein argonaute 16 isoform X1 [Jatropha curcas]
6 Hb_000043_100 0.2157835916 - - PREDICTED: uncharacterized protein LOC105797583 [Gossypium raimondii]
7 Hb_005496_100 0.2227104176 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH85-like [Populus euphratica]
8 Hb_186054_010 0.2271651658 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
9 Hb_000757_090 0.2543205245 - - SPla/RYanodine receptor domain-containing protein isoform 3 [Theobroma cacao]
10 Hb_000816_220 0.2554398028 - - PREDICTED: CBL-interacting protein kinase 18-like [Jatropha curcas]
11 Hb_000445_200 0.2664627347 - - PREDICTED: uncharacterized protein LOC105650390, partial [Jatropha curcas]
12 Hb_172665_010 0.2743562372 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
13 Hb_156924_020 0.282286745 - - PREDICTED: uncharacterized protein LOC105644346 [Jatropha curcas]
14 Hb_112255_010 0.2842047649 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
15 Hb_003377_010 0.286718366 - - hypothetical protein POPTR_0016s06140g, partial [Populus trichocarpa]
16 Hb_003376_240 0.2882036338 - - conserved hypothetical protein [Ricinus communis]
17 Hb_161207_010 0.2897056781 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
18 Hb_115572_040 0.2904658476 - - PREDICTED: uncharacterized protein LOC105632710 [Jatropha curcas]
19 Hb_104721_010 0.2946581569 - - PREDICTED: uncharacterized protein LOC105763691 [Gossypium raimondii]
20 Hb_000329_520 0.296891574 - - PREDICTED: metalloendoproteinase 1 [Jatropha curcas]

Gene co-expression network

sample Hb_158235_010 Hb_158235_010 Hb_001519_020 Hb_001519_020 Hb_158235_010--Hb_001519_020 Hb_001344_030 Hb_001344_030 Hb_158235_010--Hb_001344_030 Hb_003020_290 Hb_003020_290 Hb_158235_010--Hb_003020_290 Hb_013253_030 Hb_013253_030 Hb_158235_010--Hb_013253_030 Hb_000043_100 Hb_000043_100 Hb_158235_010--Hb_000043_100 Hb_005496_100 Hb_005496_100 Hb_158235_010--Hb_005496_100 Hb_001519_020--Hb_003020_290 Hb_001519_020--Hb_005496_100 Hb_007157_010 Hb_007157_010 Hb_001519_020--Hb_007157_010 Hb_000757_090 Hb_000757_090 Hb_001519_020--Hb_000757_090 Hb_001519_020--Hb_001344_030 Hb_001344_030--Hb_000757_090 Hb_186054_010 Hb_186054_010 Hb_001344_030--Hb_186054_010 Hb_156924_020 Hb_156924_020 Hb_001344_030--Hb_156924_020 Hb_104721_010 Hb_104721_010 Hb_001344_030--Hb_104721_010 Hb_094852_010 Hb_094852_010 Hb_001344_030--Hb_094852_010 Hb_003020_290--Hb_005496_100 Hb_003020_290--Hb_001344_030 Hb_003020_290--Hb_000757_090 Hb_003020_290--Hb_186054_010 Hb_013253_030--Hb_000043_100 Hb_000445_200 Hb_000445_200 Hb_013253_030--Hb_000445_200 Hb_009572_010 Hb_009572_010 Hb_013253_030--Hb_009572_010 Hb_000816_220 Hb_000816_220 Hb_013253_030--Hb_000816_220 Hb_000329_580 Hb_000329_580 Hb_013253_030--Hb_000329_580 Hb_000043_100--Hb_009572_010 Hb_000329_520 Hb_000329_520 Hb_000043_100--Hb_000329_520 Hb_000367_140 Hb_000367_140 Hb_000043_100--Hb_000367_140 Hb_000043_100--Hb_000816_220 Hb_008191_010 Hb_008191_010 Hb_005496_100--Hb_008191_010 Hb_161207_010 Hb_161207_010 Hb_005496_100--Hb_161207_010 Hb_012218_020 Hb_012218_020 Hb_005496_100--Hb_012218_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.0529571 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.117586 0.0923928 0 0 0.527091

CAGE analysis