Hb_008191_010

Information

Type -
Description -
Location Contig8191: 24237-27813
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008191_010 0.0 - - -
2 Hb_005496_100 0.2387443412 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH85-like [Populus euphratica]
3 Hb_002874_140 0.2580653425 - - PREDICTED: 26S proteasome non-ATPase regulatory subunit 11 homolog [Prunus mume]
4 Hb_161207_010 0.2692333881 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
5 Hb_000016_120 0.2904573094 - - PREDICTED: uncharacterized protein LOC104610208 [Nelumbo nucifera]
6 Hb_112046_010 0.292666055 - - PREDICTED: uncharacterized protein LOC105772042 [Gossypium raimondii]
7 Hb_012938_010 0.2961225189 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
8 Hb_000331_520 0.3063985641 - - Esterase precursor, putative [Ricinus communis]
9 Hb_030131_010 0.3090085582 - - PREDICTED: probable acyl-activating enzyme 1, peroxisomal, partial [Jatropha curcas]
10 Hb_001519_020 0.3145148085 - - hypothetical protein JCGZ_09913 [Jatropha curcas]
11 Hb_000162_120 0.3201722351 - - PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Jatropha curcas]
12 Hb_003020_290 0.3221843247 - - hypothetical protein CICLE_v10029104mg [Citrus clementina]
13 Hb_005654_010 0.3224459563 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
14 Hb_000375_180 0.3243488603 - - PREDICTED: uncharacterized protein LOC104593656 [Nelumbo nucifera]
15 Hb_000545_120 0.33305674 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
16 Hb_012218_020 0.334595445 - - hypothetical protein JCGZ_14688 [Jatropha curcas]
17 Hb_000184_030 0.3439225819 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Jatropha curcas]
18 Hb_006212_030 0.353107282 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
19 Hb_071130_040 0.3547715563 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000254_140 0.3550585195 - - PREDICTED: 30S ribosomal protein S17, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_008191_010 Hb_008191_010 Hb_005496_100 Hb_005496_100 Hb_008191_010--Hb_005496_100 Hb_002874_140 Hb_002874_140 Hb_008191_010--Hb_002874_140 Hb_161207_010 Hb_161207_010 Hb_008191_010--Hb_161207_010 Hb_000016_120 Hb_000016_120 Hb_008191_010--Hb_000016_120 Hb_112046_010 Hb_112046_010 Hb_008191_010--Hb_112046_010 Hb_012938_010 Hb_012938_010 Hb_008191_010--Hb_012938_010 Hb_003020_290 Hb_003020_290 Hb_005496_100--Hb_003020_290 Hb_158235_010 Hb_158235_010 Hb_005496_100--Hb_158235_010 Hb_001519_020 Hb_001519_020 Hb_005496_100--Hb_001519_020 Hb_005496_100--Hb_161207_010 Hb_012218_020 Hb_012218_020 Hb_005496_100--Hb_012218_020 Hb_111854_010 Hb_111854_010 Hb_002874_140--Hb_111854_010 Hb_000340_540 Hb_000340_540 Hb_002874_140--Hb_000340_540 Hb_187024_090 Hb_187024_090 Hb_002874_140--Hb_187024_090 Hb_008008_020 Hb_008008_020 Hb_002874_140--Hb_008008_020 Hb_002996_020 Hb_002996_020 Hb_002874_140--Hb_002996_020 Hb_000184_030 Hb_000184_030 Hb_161207_010--Hb_000184_030 Hb_009615_180 Hb_009615_180 Hb_161207_010--Hb_009615_180 Hb_145157_010 Hb_145157_010 Hb_161207_010--Hb_145157_010 Hb_003622_020 Hb_003622_020 Hb_161207_010--Hb_003622_020 Hb_000473_060 Hb_000473_060 Hb_161207_010--Hb_000473_060 Hb_000016_120--Hb_012938_010 Hb_003124_210 Hb_003124_210 Hb_000016_120--Hb_003124_210 Hb_000545_120 Hb_000545_120 Hb_000016_120--Hb_000545_120 Hb_000375_180 Hb_000375_180 Hb_000016_120--Hb_000375_180 Hb_005654_010 Hb_005654_010 Hb_000016_120--Hb_005654_010 Hb_000162_120 Hb_000162_120 Hb_112046_010--Hb_000162_120 Hb_122273_010 Hb_122273_010 Hb_112046_010--Hb_122273_010 Hb_001490_030 Hb_001490_030 Hb_112046_010--Hb_001490_030 Hb_000627_260 Hb_000627_260 Hb_112046_010--Hb_000627_260 Hb_016567_010 Hb_016567_010 Hb_112046_010--Hb_016567_010 Hb_030131_010 Hb_030131_010 Hb_112046_010--Hb_030131_010 Hb_012938_010--Hb_005654_010 Hb_071130_040 Hb_071130_040 Hb_012938_010--Hb_071130_040 Hb_012938_010--Hb_000375_180 Hb_002811_340 Hb_002811_340 Hb_012938_010--Hb_002811_340 Hb_156924_020 Hb_156924_020 Hb_012938_010--Hb_156924_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0225759 0 0.0308598 0 0.0239133
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0310621 0.0488749 0 0 0.102269

CAGE analysis