Hb_003622_020

Information

Type -
Description -
Location Contig3622: 20142-21368
Sequence    

Annotation

kegg
ID rcu:RCOM_0248860
description electron transporter, putative
nr
ID XP_012085994.1
description PREDICTED: uncharacterized protein At5g39865-like [Jatropha curcas]
swissprot
ID Q9FLE8
description Uncharacterized protein At5g39865 OS=Arabidopsis thaliana GN=At5g39865 PE=2 SV=1
trembl
ID A0A067K391
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22485 PE=4 SV=1
Gene Ontology
ID GO:0005623
description glutaredoxin family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003622_020 0.0 - - PREDICTED: uncharacterized protein At5g39865-like [Jatropha curcas]
2 Hb_006856_030 0.1427243486 - - Uridine kinase-like protein 4 [Glycine soja]
3 Hb_000521_090 0.1686377556 - - PREDICTED: RING-H2 finger protein ATL5 isoform X1 [Jatropha curcas]
4 Hb_126917_010 0.1778195728 - - PREDICTED: uncharacterized protein LOC105646333 [Jatropha curcas]
5 Hb_003077_130 0.18179645 - - hypothetical protein JCGZ_22476 [Jatropha curcas]
6 Hb_003427_080 0.1823093649 - - PREDICTED: probable alanine--tRNA ligase, chloroplastic [Jatropha curcas]
7 Hb_002681_080 0.1850656453 - - PREDICTED: uncharacterized protein LOC105633817 isoform X1 [Jatropha curcas]
8 Hb_007933_030 0.1861211731 - - PREDICTED: uncharacterized protein LOC105639932 [Jatropha curcas]
9 Hb_000056_090 0.1878502208 - - UDP-galactose transporter 3 isoform 1 [Theobroma cacao]
10 Hb_000084_140 0.1884481641 - - Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis]
11 Hb_005375_110 0.1889695423 - - metal tolerance protein 1 [Populus trichocarpa x Populus deltoides]
12 Hb_000300_020 0.1901289237 - - PREDICTED: grpE protein homolog, mitochondrial [Jatropha curcas]
13 Hb_000402_170 0.1915600286 - - PREDICTED: glutamate--glyoxylate aminotransferase 2 [Jatropha curcas]
14 Hb_001793_050 0.193325511 - - PREDICTED: uncharacterized protein LOC105632663 [Jatropha curcas]
15 Hb_000976_130 0.1952197355 - - PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 2 [Jatropha curcas]
16 Hb_003207_030 0.1953572943 - - hypothetical protein VITISV_027754 [Vitis vinifera]
17 Hb_000038_020 0.1957425243 - - PREDICTED: ATP-dependent zinc metalloprotease FTSH 2, chloroplastic [Jatropha curcas]
18 Hb_006062_030 0.1957446516 - - PREDICTED: translation initiation factor IF-2, chloroplastic [Jatropha curcas]
19 Hb_000661_090 0.1971425925 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Jatropha curcas]
20 Hb_007002_010 0.1983389777 - - PREDICTED: dnaJ protein ERDJ3B [Jatropha curcas]

Gene co-expression network

sample Hb_003622_020 Hb_003622_020 Hb_006856_030 Hb_006856_030 Hb_003622_020--Hb_006856_030 Hb_000521_090 Hb_000521_090 Hb_003622_020--Hb_000521_090 Hb_126917_010 Hb_126917_010 Hb_003622_020--Hb_126917_010 Hb_003077_130 Hb_003077_130 Hb_003622_020--Hb_003077_130 Hb_003427_080 Hb_003427_080 Hb_003622_020--Hb_003427_080 Hb_002681_080 Hb_002681_080 Hb_003622_020--Hb_002681_080 Hb_000402_170 Hb_000402_170 Hb_006856_030--Hb_000402_170 Hb_006856_030--Hb_003427_080 Hb_000890_110 Hb_000890_110 Hb_006856_030--Hb_000890_110 Hb_000754_050 Hb_000754_050 Hb_006856_030--Hb_000754_050 Hb_003777_020 Hb_003777_020 Hb_006856_030--Hb_003777_020 Hb_000117_030 Hb_000117_030 Hb_000521_090--Hb_000117_030 Hb_000521_090--Hb_002681_080 Hb_004735_020 Hb_004735_020 Hb_000521_090--Hb_004735_020 Hb_007933_030 Hb_007933_030 Hb_000521_090--Hb_007933_030 Hb_000062_400 Hb_000062_400 Hb_000521_090--Hb_000062_400 Hb_005375_110 Hb_005375_110 Hb_000521_090--Hb_005375_110 Hb_000834_080 Hb_000834_080 Hb_126917_010--Hb_000834_080 Hb_009687_020 Hb_009687_020 Hb_126917_010--Hb_009687_020 Hb_000300_020 Hb_000300_020 Hb_126917_010--Hb_000300_020 Hb_003171_030 Hb_003171_030 Hb_126917_010--Hb_003171_030 Hb_011053_030 Hb_011053_030 Hb_126917_010--Hb_011053_030 Hb_001269_500 Hb_001269_500 Hb_126917_010--Hb_001269_500 Hb_024714_080 Hb_024714_080 Hb_003077_130--Hb_024714_080 Hb_000069_490 Hb_000069_490 Hb_003077_130--Hb_000069_490 Hb_000997_140 Hb_000997_140 Hb_003077_130--Hb_000997_140 Hb_004785_070 Hb_004785_070 Hb_003077_130--Hb_004785_070 Hb_028707_110 Hb_028707_110 Hb_003077_130--Hb_028707_110 Hb_010757_030 Hb_010757_030 Hb_003077_130--Hb_010757_030 Hb_003427_080--Hb_000402_170 Hb_000053_120 Hb_000053_120 Hb_003427_080--Hb_000053_120 Hb_000038_020 Hb_000038_020 Hb_003427_080--Hb_000038_020 Hb_000667_140 Hb_000667_140 Hb_003427_080--Hb_000667_140 Hb_003427_080--Hb_003077_130 Hb_166127_030 Hb_166127_030 Hb_003427_080--Hb_166127_030 Hb_002681_080--Hb_010757_030 Hb_007002_010 Hb_007002_010 Hb_002681_080--Hb_007002_010 Hb_000599_230 Hb_000599_230 Hb_002681_080--Hb_000599_230 Hb_002681_080--Hb_003077_130 Hb_000352_220 Hb_000352_220 Hb_002681_080--Hb_000352_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.53684 3.36809 5.28749 7.95045 4.36778 2.19579
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.05688 1.3674 0.231508 1.95373 30.2012

CAGE analysis