Hb_161207_010

Information

Type -
Description -
Location Contig161207: 858-3022
Sequence    

Annotation

kegg
ID pda:103715912
description uncharacterized LOC103715912
nr
ID XP_012068505.1
description PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID M5XSR7
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb016975mg PE=4 SV=1
Gene Ontology
ID GO:0003676
description PREDICTED: uncharacterized protein LOC105631113

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_161207_010 0.0 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
2 Hb_000184_030 0.1835791379 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Jatropha curcas]
3 Hb_005496_100 0.2433830445 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH85-like [Populus euphratica]
4 Hb_009615_180 0.2550341588 - - lipoic acid synthetase, putative [Ricinus communis]
5 Hb_145157_010 0.2601825922 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
6 Hb_003622_020 0.2613702242 - - PREDICTED: uncharacterized protein At5g39865-like [Jatropha curcas]
7 Hb_000473_060 0.2623363178 - - PREDICTED: psbP domain-containing protein 2, chloroplastic [Jatropha curcas]
8 Hb_002411_020 0.2624761319 - - hypothetical protein JCGZ_24577 [Jatropha curcas]
9 Hb_006856_030 0.2666164741 - - Uridine kinase-like protein 4 [Glycine soja]
10 Hb_030131_010 0.2689540753 - - PREDICTED: probable acyl-activating enzyme 1, peroxisomal, partial [Jatropha curcas]
11 Hb_008191_010 0.2692333881 - - -
12 Hb_000254_140 0.2715294689 - - PREDICTED: 30S ribosomal protein S17, chloroplastic [Jatropha curcas]
13 Hb_004109_160 0.2716059692 - - PREDICTED: peptide methionine sulfoxide reductase B1, chloroplastic [Jatropha curcas]
14 Hb_003020_290 0.2717368328 - - hypothetical protein CICLE_v10029104mg [Citrus clementina]
15 Hb_172665_010 0.2774811692 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
16 Hb_001294_030 0.2802902224 - - PREDICTED: uncharacterized protein LOC105644307 [Jatropha curcas]
17 Hb_032208_080 0.2803957561 - - PREDICTED: phytoene synthase 2, chloroplastic-like [Jatropha curcas]
18 Hb_019613_010 0.2813600738 - - ubiquitin-protein ligase, putative [Ricinus communis]
19 Hb_013253_030 0.2824103469 - - PREDICTED: protein argonaute 16 isoform X1 [Jatropha curcas]
20 Hb_000331_520 0.2827323867 - - Esterase precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_161207_010 Hb_161207_010 Hb_000184_030 Hb_000184_030 Hb_161207_010--Hb_000184_030 Hb_005496_100 Hb_005496_100 Hb_161207_010--Hb_005496_100 Hb_009615_180 Hb_009615_180 Hb_161207_010--Hb_009615_180 Hb_145157_010 Hb_145157_010 Hb_161207_010--Hb_145157_010 Hb_003622_020 Hb_003622_020 Hb_161207_010--Hb_003622_020 Hb_000473_060 Hb_000473_060 Hb_161207_010--Hb_000473_060 Hb_000184_030--Hb_009615_180 Hb_001294_030 Hb_001294_030 Hb_000184_030--Hb_001294_030 Hb_000062_520 Hb_000062_520 Hb_000184_030--Hb_000062_520 Hb_000189_520 Hb_000189_520 Hb_000184_030--Hb_000189_520 Hb_001484_080 Hb_001484_080 Hb_000184_030--Hb_001484_080 Hb_114861_010 Hb_114861_010 Hb_000184_030--Hb_114861_010 Hb_003020_290 Hb_003020_290 Hb_005496_100--Hb_003020_290 Hb_158235_010 Hb_158235_010 Hb_005496_100--Hb_158235_010 Hb_001519_020 Hb_001519_020 Hb_005496_100--Hb_001519_020 Hb_008191_010 Hb_008191_010 Hb_005496_100--Hb_008191_010 Hb_012218_020 Hb_012218_020 Hb_005496_100--Hb_012218_020 Hb_003226_190 Hb_003226_190 Hb_009615_180--Hb_003226_190 Hb_002783_150 Hb_002783_150 Hb_009615_180--Hb_002783_150 Hb_009615_180--Hb_001294_030 Hb_126917_010 Hb_126917_010 Hb_009615_180--Hb_126917_010 Hb_000352_220 Hb_000352_220 Hb_009615_180--Hb_000352_220 Hb_032208_080 Hb_032208_080 Hb_145157_010--Hb_032208_080 Hb_001369_760 Hb_001369_760 Hb_145157_010--Hb_001369_760 Hb_032705_020 Hb_032705_020 Hb_145157_010--Hb_032705_020 Hb_000754_050 Hb_000754_050 Hb_145157_010--Hb_000754_050 Hb_004289_040 Hb_004289_040 Hb_145157_010--Hb_004289_040 Hb_006856_030 Hb_006856_030 Hb_003622_020--Hb_006856_030 Hb_000521_090 Hb_000521_090 Hb_003622_020--Hb_000521_090 Hb_003622_020--Hb_126917_010 Hb_003077_130 Hb_003077_130 Hb_003622_020--Hb_003077_130 Hb_003427_080 Hb_003427_080 Hb_003622_020--Hb_003427_080 Hb_002681_080 Hb_002681_080 Hb_003622_020--Hb_002681_080 Hb_004109_160 Hb_004109_160 Hb_000473_060--Hb_004109_160 Hb_001621_060 Hb_001621_060 Hb_000473_060--Hb_001621_060 Hb_011053_020 Hb_011053_020 Hb_000473_060--Hb_011053_020 Hb_001369_700 Hb_001369_700 Hb_000473_060--Hb_001369_700 Hb_000473_060--Hb_000189_520 Hb_002078_300 Hb_002078_300 Hb_000473_060--Hb_002078_300
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.00988826 0.00888932 0.0454138 0.0111996 0.0117571
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0544362 0.042829 0 0.00853475 0.180042

CAGE analysis