Hb_004289_040

Information

Type -
Description -
Location Contig4289: 71599-75161
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa025968mg
description hypothetical protein
nr
ID XP_009786188.1
description PREDICTED: uncharacterized protein LOC104234330 [Nicotiana sylvestris]
swissprot
ID -
description -
trembl
ID M5X4P9
description Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa025968mg PE=4 SV=1
Gene Ontology
ID GO:0003676
description PREDICTED: uncharacterized protein LOC104216022, partial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004289_040 0.0 - - PREDICTED: uncharacterized protein LOC104234330 [Nicotiana sylvestris]
2 Hb_003124_210 0.255557067 - - conserved hypothetical protein [Ricinus communis]
3 Hb_032705_020 0.2761936545 - - PREDICTED: uncharacterized protein LOC104105697 [Nicotiana tomentosiformis]
4 Hb_145157_010 0.2975294996 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
5 Hb_000545_120 0.3023593056 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
6 Hb_014440_010 0.309843769 transcription factor TF Family: RWP-RK transcription factor, putative [Ricinus communis]
7 Hb_002811_340 0.3148160984 - - PREDICTED: ammonium transporter 3 member 2-like [Populus euphratica]
8 Hb_000375_180 0.3383607188 - - PREDICTED: uncharacterized protein LOC104593656 [Nelumbo nucifera]
9 Hb_012218_020 0.3425130271 - - hypothetical protein JCGZ_14688 [Jatropha curcas]
10 Hb_182831_010 0.3517471501 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
11 Hb_012938_010 0.3743207581 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
12 Hb_000449_060 0.3754965743 - - -
13 Hb_002602_020 0.3762597039 - - -
14 Hb_003020_290 0.3785348838 - - hypothetical protein CICLE_v10029104mg [Citrus clementina]
15 Hb_001604_050 0.3809327327 - - PREDICTED: uncharacterized protein LOC105639208 [Jatropha curcas]
16 Hb_001369_760 0.382942038 - - hypothetical protein PRUPE_ppa019417mg [Prunus persica]
17 Hb_000375_310 0.3842091071 - - hypothetical protein JCGZ_18643 [Jatropha curcas]
18 Hb_010997_020 0.3893427233 - - -
19 Hb_000529_230 0.3925823604 - - PREDICTED: putative leucine-rich repeat-containing protein DDB_G0290503 [Prunus mume]
20 Hb_001818_110 0.3973379301 - - -

Gene co-expression network

sample Hb_004289_040 Hb_004289_040 Hb_003124_210 Hb_003124_210 Hb_004289_040--Hb_003124_210 Hb_032705_020 Hb_032705_020 Hb_004289_040--Hb_032705_020 Hb_145157_010 Hb_145157_010 Hb_004289_040--Hb_145157_010 Hb_000545_120 Hb_000545_120 Hb_004289_040--Hb_000545_120 Hb_014440_010 Hb_014440_010 Hb_004289_040--Hb_014440_010 Hb_002811_340 Hb_002811_340 Hb_004289_040--Hb_002811_340 Hb_000016_120 Hb_000016_120 Hb_003124_210--Hb_000016_120 Hb_003124_210--Hb_000545_120 Hb_000375_180 Hb_000375_180 Hb_003124_210--Hb_000375_180 Hb_001604_050 Hb_001604_050 Hb_003124_210--Hb_001604_050 Hb_049944_010 Hb_049944_010 Hb_003124_210--Hb_049944_010 Hb_003915_040 Hb_003915_040 Hb_032705_020--Hb_003915_040 Hb_032705_020--Hb_145157_010 Hb_182831_010 Hb_182831_010 Hb_032705_020--Hb_182831_010 Hb_028751_020 Hb_028751_020 Hb_032705_020--Hb_028751_020 Hb_001496_140 Hb_001496_140 Hb_032705_020--Hb_001496_140 Hb_032208_080 Hb_032208_080 Hb_145157_010--Hb_032208_080 Hb_001369_760 Hb_001369_760 Hb_145157_010--Hb_001369_760 Hb_161207_010 Hb_161207_010 Hb_145157_010--Hb_161207_010 Hb_000754_050 Hb_000754_050 Hb_145157_010--Hb_000754_050 Hb_000545_120--Hb_000375_180 Hb_012938_010 Hb_012938_010 Hb_000545_120--Hb_012938_010 Hb_000545_120--Hb_000016_120 Hb_005654_010 Hb_005654_010 Hb_000545_120--Hb_005654_010 Hb_001818_110 Hb_001818_110 Hb_014440_010--Hb_001818_110 Hb_178654_020 Hb_178654_020 Hb_014440_010--Hb_178654_020 Hb_156924_020 Hb_156924_020 Hb_014440_010--Hb_156924_020 Hb_000757_090 Hb_000757_090 Hb_014440_010--Hb_000757_090 Hb_014440_010--Hb_000375_180 Hb_012218_020 Hb_012218_020 Hb_002811_340--Hb_012218_020 Hb_002811_340--Hb_012938_010 Hb_000738_010 Hb_000738_010 Hb_002811_340--Hb_000738_010 Hb_002811_340--Hb_178654_020 Hb_094852_010 Hb_094852_010 Hb_002811_340--Hb_094852_010 Hb_002811_340--Hb_156924_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.0392227 0.0344052
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.044717 0.0351729 0 0 0.0724464

CAGE analysis