Hb_000738_010

Information

Type -
Description -
Location Contig738: 23521-30374
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa021229mg
description hypothetical protein
nr
ID XP_007213082.1
description hypothetical protein PRUPE_ppa021229mg [Prunus persica]
swissprot
ID P0CT39
description Transposon Tf2-6 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-6 PE=3 SV=1
trembl
ID M5WLY8
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021229mg PE=4 SV=1
Gene Ontology
ID GO:0003676
description dna rna polymerases superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000738_010 0.0 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
2 Hb_187024_070 0.1229802948 - - PREDICTED: uncharacterized protein LOC105785446 [Gossypium raimondii]
3 Hb_012324_020 0.232651998 - - -
4 Hb_094721_010 0.2328795912 - - PREDICTED: uncharacterized protein LOC104809818, partial [Tarenaya hassleriana]
5 Hb_000003_770 0.2413353545 - - -
6 Hb_002636_020 0.2426217378 - - -
7 Hb_001379_130 0.2481136477 - - PREDICTED: pre-mRNA-processing protein 40A isoform X2 [Jatropha curcas]
8 Hb_088496_010 0.2500118965 - - PREDICTED: uncharacterized protein LOC104889111 [Beta vulgaris subsp. vulgaris]
9 Hb_002811_340 0.2563185126 - - PREDICTED: ammonium transporter 3 member 2-like [Populus euphratica]
10 Hb_004297_030 0.2600217235 - - PREDICTED: uncharacterized protein LOC105633198 [Jatropha curcas]
11 Hb_005408_040 0.2852377331 - - -
12 Hb_000067_020 0.2889573312 desease resistance Gene Name: NB-ARC PREDICTED: inactive disease resistance protein RPS4-like [Jatropha curcas]
13 Hb_145890_010 0.291374499 - - unnamed protein product [Vitis vinifera]
14 Hb_000563_270 0.2933943364 - - -
15 Hb_000434_020 0.3027178788 - - PREDICTED: protein yippee-like At5g53940 [Jatropha curcas]
16 Hb_007765_120 0.3061822881 - - glycogen phosphorylase, putative [Ricinus communis]
17 Hb_039305_010 0.3063363452 - - hypothetical protein JCGZ_18422 [Jatropha curcas]
18 Hb_001257_020 0.3067852315 - - -
19 Hb_000915_100 0.3114574839 - - PREDICTED: auxin-induced protein 15A [Jatropha curcas]
20 Hb_000046_200 0.3118002619 - - PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like [Jatropha curcas]

Gene co-expression network

sample Hb_000738_010 Hb_000738_010 Hb_187024_070 Hb_187024_070 Hb_000738_010--Hb_187024_070 Hb_012324_020 Hb_012324_020 Hb_000738_010--Hb_012324_020 Hb_094721_010 Hb_094721_010 Hb_000738_010--Hb_094721_010 Hb_000003_770 Hb_000003_770 Hb_000738_010--Hb_000003_770 Hb_002636_020 Hb_002636_020 Hb_000738_010--Hb_002636_020 Hb_001379_130 Hb_001379_130 Hb_000738_010--Hb_001379_130 Hb_000046_200 Hb_000046_200 Hb_187024_070--Hb_000046_200 Hb_187024_070--Hb_001379_130 Hb_187024_070--Hb_012324_020 Hb_187024_070--Hb_094721_010 Hb_187024_070--Hb_000003_770 Hb_012324_020--Hb_094721_010 Hb_012324_020--Hb_000003_770 Hb_088496_010 Hb_088496_010 Hb_012324_020--Hb_088496_010 Hb_012324_020--Hb_001379_130 Hb_004297_030 Hb_004297_030 Hb_012324_020--Hb_004297_030 Hb_005408_040 Hb_005408_040 Hb_012324_020--Hb_005408_040 Hb_094721_010--Hb_000003_770 Hb_094721_010--Hb_088496_010 Hb_094721_010--Hb_004297_030 Hb_094721_010--Hb_001379_130 Hb_094721_010--Hb_005408_040 Hb_000003_770--Hb_001379_130 Hb_000003_770--Hb_088496_010 Hb_001257_020 Hb_001257_020 Hb_000003_770--Hb_001257_020 Hb_000003_770--Hb_004297_030 Hb_000395_060 Hb_000395_060 Hb_002636_020--Hb_000395_060 Hb_175572_010 Hb_175572_010 Hb_002636_020--Hb_175572_010 Hb_002636_020--Hb_187024_070 Hb_000107_640 Hb_000107_640 Hb_002636_020--Hb_000107_640 Hb_002636_020--Hb_005408_040 Hb_001379_130--Hb_001257_020 Hb_001379_130--Hb_088496_010 Hb_001379_130--Hb_004297_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0.0202333
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0507563 0.0599175 0 0 0.0143072

CAGE analysis