Hb_012218_020

Information

Type -
Description -
Location Contig12218: 89810-93194
Sequence    

Annotation

kegg
ID pop:POPTR_0014s17850g
description POPTRDRAFT_732680; ECERIFERUM 1 family protein
nr
ID KDP28917.1
description hypothetical protein JCGZ_14688 [Jatropha curcas]
swissprot
ID F4HVY0
description Protein ECERIFERUM 1 OS=Arabidopsis thaliana GN=CER1 PE=1 SV=1
trembl
ID A0A067JYF3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14688 PE=4 SV=1
Gene Ontology
ID GO:0016021
description protein eceriferum 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012218_020 0.0 - - hypothetical protein JCGZ_14688 [Jatropha curcas]
2 Hb_002811_340 0.1740445025 - - PREDICTED: ammonium transporter 3 member 2-like [Populus euphratica]
3 Hb_033222_010 0.2552358989 - - PREDICTED: uncharacterized protein LOC105173350 [Sesamum indicum]
4 Hb_005496_100 0.2769645756 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH85-like [Populus euphratica]
5 Hb_012938_010 0.3046983401 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
6 Hb_000002_420 0.3194704727 - - PREDICTED: serine/threonine-protein kinase BLUS1-like [Citrus sinensis]
7 Hb_000016_120 0.3226285705 - - PREDICTED: uncharacterized protein LOC104610208 [Nelumbo nucifera]
8 Hb_003124_210 0.3337540892 - - conserved hypothetical protein [Ricinus communis]
9 Hb_008191_010 0.334595445 - - -
10 Hb_000738_010 0.3376983604 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
11 Hb_004289_040 0.3425130271 - - PREDICTED: uncharacterized protein LOC104234330 [Nicotiana sylvestris]
12 Hb_000545_120 0.3460328864 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
13 Hb_010997_020 0.3468405964 - - -
14 Hb_003020_290 0.3503529474 - - hypothetical protein CICLE_v10029104mg [Citrus clementina]
15 Hb_000227_050 0.3551224447 - - -
16 Hb_002094_050 0.3574623197 - - PREDICTED: organic cation/carnitine transporter 4-like, partial [Eucalyptus grandis]
17 Hb_112046_010 0.36574862 - - PREDICTED: uncharacterized protein LOC105772042 [Gossypium raimondii]
18 Hb_094852_010 0.3724611382 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
19 Hb_002636_020 0.3767180978 - - -
20 Hb_091194_010 0.3769774492 - - hypothetical protein POPTR_0006s05430g [Populus trichocarpa]

Gene co-expression network

sample Hb_012218_020 Hb_012218_020 Hb_002811_340 Hb_002811_340 Hb_012218_020--Hb_002811_340 Hb_033222_010 Hb_033222_010 Hb_012218_020--Hb_033222_010 Hb_005496_100 Hb_005496_100 Hb_012218_020--Hb_005496_100 Hb_012938_010 Hb_012938_010 Hb_012218_020--Hb_012938_010 Hb_000002_420 Hb_000002_420 Hb_012218_020--Hb_000002_420 Hb_000016_120 Hb_000016_120 Hb_012218_020--Hb_000016_120 Hb_002811_340--Hb_012938_010 Hb_000738_010 Hb_000738_010 Hb_002811_340--Hb_000738_010 Hb_178654_020 Hb_178654_020 Hb_002811_340--Hb_178654_020 Hb_094852_010 Hb_094852_010 Hb_002811_340--Hb_094852_010 Hb_156924_020 Hb_156924_020 Hb_002811_340--Hb_156924_020 Hb_000227_050 Hb_000227_050 Hb_033222_010--Hb_000227_050 Hb_000028_210 Hb_000028_210 Hb_033222_010--Hb_000028_210 Hb_033222_010--Hb_000002_420 Hb_001723_050 Hb_001723_050 Hb_033222_010--Hb_001723_050 Hb_000160_160 Hb_000160_160 Hb_033222_010--Hb_000160_160 Hb_003020_290 Hb_003020_290 Hb_005496_100--Hb_003020_290 Hb_158235_010 Hb_158235_010 Hb_005496_100--Hb_158235_010 Hb_001519_020 Hb_001519_020 Hb_005496_100--Hb_001519_020 Hb_008191_010 Hb_008191_010 Hb_005496_100--Hb_008191_010 Hb_161207_010 Hb_161207_010 Hb_005496_100--Hb_161207_010 Hb_005654_010 Hb_005654_010 Hb_012938_010--Hb_005654_010 Hb_071130_040 Hb_071130_040 Hb_012938_010--Hb_071130_040 Hb_000375_180 Hb_000375_180 Hb_012938_010--Hb_000375_180 Hb_012938_010--Hb_000016_120 Hb_012938_010--Hb_156924_020 Hb_001733_060 Hb_001733_060 Hb_000002_420--Hb_001733_060 Hb_007765_120 Hb_007765_120 Hb_000002_420--Hb_007765_120 Hb_000184_100 Hb_000184_100 Hb_000002_420--Hb_000184_100 Hb_137461_010 Hb_137461_010 Hb_000002_420--Hb_137461_010 Hb_003964_090 Hb_003964_090 Hb_000002_420--Hb_003964_090 Hb_003124_210 Hb_003124_210 Hb_000016_120--Hb_003124_210 Hb_000545_120 Hb_000545_120 Hb_000016_120--Hb_000545_120 Hb_000016_120--Hb_000375_180 Hb_000016_120--Hb_005654_010 Hb_000016_120--Hb_008191_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.0475278 0 0.265879
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.374106 0.181126 0 0 0.38001

CAGE analysis