Hb_003964_090

Information

Type -
Description -
Location Contig3964: 126659-128435
Sequence    

Annotation

kegg
ID rcu:RCOM_1620970
description 14-3-3 protein, putative
nr
ID XP_012067762.1
description PREDICTED: 14-3-3-like protein GF14 iota [Jatropha curcas]
swissprot
ID Q9C5W6
description 14-3-3-like protein GF14 iota OS=Arabidopsis thaliana GN=GRF12 PE=2 SV=1
trembl
ID A0A067KYS6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15699 PE=3 SV=1
Gene Ontology
ID GO:0019904
description 14-3-3-like protein gf14 iota

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003964_090 0.0 - - PREDICTED: 14-3-3-like protein GF14 iota [Jatropha curcas]
2 Hb_005839_050 0.2291107753 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
3 Hb_049944_010 0.22931189 - - transducin family protein [Populus trichocarpa]
4 Hb_012052_010 0.2393503622 - - PREDICTED: uncharacterized protein LOC103323653 [Prunus mume]
5 Hb_001427_060 0.240444575 - - -
6 Hb_013818_050 0.2449582166 - - PREDICTED: uncharacterized protein LOC105629143 isoform X2 [Jatropha curcas]
7 Hb_000656_100 0.2459690377 - - PREDICTED: uncharacterized protein LOC105633651 [Jatropha curcas]
8 Hb_137461_010 0.2475211051 - - hypothetical protein POPTR_0011s03680g [Populus trichocarpa]
9 Hb_027472_030 0.2514879195 - - RNA helicase 36, partial [Manihot esculenta]
10 Hb_033363_070 0.25893928 - - PREDICTED: LOW QUALITY PROTEIN: methionine aminopeptidase 1B, chloroplastic, partial [Populus euphratica]
11 Hb_000007_460 0.2624029597 - - PREDICTED: uncharacterized protein LOC105641948 [Jatropha curcas]
12 Hb_075964_010 0.2646064034 - - hypothetical protein JCGZ_20198 [Jatropha curcas]
13 Hb_004137_080 0.2653822934 - - conserved hypothetical protein [Ricinus communis]
14 Hb_003581_010 0.2685579724 - - hypothetical protein VITISV_004687 [Vitis vinifera]
15 Hb_005916_030 0.2761917209 - - PREDICTED: uncharacterized protein At2g29880-like [Jatropha curcas]
16 Hb_000028_210 0.2785596302 - - hypothetical protein CISIN_1g0103302mg, partial [Citrus sinensis]
17 Hb_032927_010 0.2914831603 - - -
18 Hb_006846_140 0.2920691253 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000003_180 0.2930495313 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001546_050 0.2968184475 - - -

Gene co-expression network

sample Hb_003964_090 Hb_003964_090 Hb_005839_050 Hb_005839_050 Hb_003964_090--Hb_005839_050 Hb_049944_010 Hb_049944_010 Hb_003964_090--Hb_049944_010 Hb_012052_010 Hb_012052_010 Hb_003964_090--Hb_012052_010 Hb_001427_060 Hb_001427_060 Hb_003964_090--Hb_001427_060 Hb_013818_050 Hb_013818_050 Hb_003964_090--Hb_013818_050 Hb_000656_100 Hb_000656_100 Hb_003964_090--Hb_000656_100 Hb_003061_010 Hb_003061_010 Hb_005839_050--Hb_003061_010 Hb_005916_030 Hb_005916_030 Hb_005839_050--Hb_005916_030 Hb_002151_080 Hb_002151_080 Hb_005839_050--Hb_002151_080 Hb_006018_070 Hb_006018_070 Hb_005839_050--Hb_006018_070 Hb_005839_050--Hb_049944_010 Hb_137461_010 Hb_137461_010 Hb_049944_010--Hb_137461_010 Hb_004137_080 Hb_004137_080 Hb_049944_010--Hb_004137_080 Hb_027472_030 Hb_027472_030 Hb_049944_010--Hb_027472_030 Hb_001912_070 Hb_001912_070 Hb_049944_010--Hb_001912_070 Hb_012052_010--Hb_027472_030 Hb_000007_460 Hb_000007_460 Hb_012052_010--Hb_000007_460 Hb_000161_120 Hb_000161_120 Hb_012052_010--Hb_000161_120 Hb_033363_070 Hb_033363_070 Hb_012052_010--Hb_033363_070 Hb_003581_010 Hb_003581_010 Hb_012052_010--Hb_003581_010 Hb_005054_070 Hb_005054_070 Hb_012052_010--Hb_005054_070 Hb_075964_010 Hb_075964_010 Hb_001427_060--Hb_075964_010 Hb_001427_060--Hb_000007_460 Hb_001427_060--Hb_003581_010 Hb_068014_010 Hb_068014_010 Hb_001427_060--Hb_068014_010 Hb_007484_040 Hb_007484_040 Hb_001427_060--Hb_007484_040 Hb_013691_030 Hb_013691_030 Hb_001427_060--Hb_013691_030 Hb_013818_050--Hb_012052_010 Hb_013818_050--Hb_001427_060 Hb_017462_010 Hb_017462_010 Hb_013818_050--Hb_017462_010 Hb_013818_050--Hb_007484_040 Hb_014834_040 Hb_014834_040 Hb_013818_050--Hb_014834_040 Hb_067776_010 Hb_067776_010 Hb_000656_100--Hb_067776_010 Hb_032927_010 Hb_032927_010 Hb_000656_100--Hb_032927_010 Hb_007012_020 Hb_007012_020 Hb_000656_100--Hb_007012_020 Hb_006502_080 Hb_006502_080 Hb_000656_100--Hb_006502_080 Hb_000812_040 Hb_000812_040 Hb_000656_100--Hb_000812_040 Hb_005615_080 Hb_005615_080 Hb_000656_100--Hb_005615_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0989416 0.0277149 0.0699502 0.139863 0.91567
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.169211 0.332541 0 0.216796 0.131006

CAGE analysis