Hb_014834_040

Information

Type -
Description -
Location Contig14834: 28025-28524
Sequence    

Annotation

kegg
ID -
description -
nr
ID KDP39878.1
description hypothetical protein JCGZ_03409 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KY24
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03409 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12169: 25886-28279 , PASA_asmbl_12172: 25804-28460
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014834_040 0.0 - - hypothetical protein JCGZ_03409 [Jatropha curcas]
2 Hb_001571_110 0.1252374374 - - PREDICTED: 60S ribosomal protein L44-like [Gossypium raimondii]
3 Hb_042710_010 0.1419366709 - - PREDICTED: 40S ribosomal protein S15a-1 [Jatropha curcas]
4 Hb_098852_010 0.1494864963 - - PREDICTED: MATH domain-containing protein At5g43560-like [Jatropha curcas]
5 Hb_132180_010 0.1576224288 - - PREDICTED: protein SPIRAL1-like 1 [Populus euphratica]
6 Hb_020035_020 0.1579415124 - - PREDICTED: uncharacterized protein LOC105631020 [Jatropha curcas]
7 Hb_006995_040 0.1582423106 - - PREDICTED: LOW QUALITY PROTEIN: 14 kDa zinc-binding protein-like [Pyrus x bretschneideri]
8 Hb_000656_340 0.1590882797 - - hypothetical protein JCGZ_24686 [Jatropha curcas]
9 Hb_182964_010 0.1601089564 - - PREDICTED: uncharacterized protein LOC105642044 isoform X2 [Jatropha curcas]
10 Hb_000097_010 0.1626940004 - - -
11 Hb_001017_060 0.1629129268 - - Auxin-induced protein 5NG4, putative [Ricinus communis]
12 Hb_007894_230 0.1660328988 - - 30S ribosomal protein S14, putative [Ricinus communis]
13 Hb_021596_080 0.1661266789 - - 50S ribosomal protein L33A [Hevea brasiliensis]
14 Hb_011644_010 0.1677826064 - - PREDICTED: probable choline-phosphate cytidylyltransferase [Elaeis guineensis]
15 Hb_041205_010 0.172712846 - - conserved hypothetical protein [Ricinus communis]
16 Hb_175976_010 0.1736101023 - - -
17 Hb_001610_130 0.1753276499 - - 40S ribosomal protein S30 [Medicago truncatula]
18 Hb_140543_010 0.1754767213 - - -
19 Hb_002784_070 0.178546089 - - BnaUnng01470D [Brassica napus]
20 Hb_001296_030 0.1792225399 - - PREDICTED: uncharacterized protein LOC105638276 [Jatropha curcas]

Gene co-expression network

sample Hb_014834_040 Hb_014834_040 Hb_001571_110 Hb_001571_110 Hb_014834_040--Hb_001571_110 Hb_042710_010 Hb_042710_010 Hb_014834_040--Hb_042710_010 Hb_098852_010 Hb_098852_010 Hb_014834_040--Hb_098852_010 Hb_132180_010 Hb_132180_010 Hb_014834_040--Hb_132180_010 Hb_020035_020 Hb_020035_020 Hb_014834_040--Hb_020035_020 Hb_006995_040 Hb_006995_040 Hb_014834_040--Hb_006995_040 Hb_007894_230 Hb_007894_230 Hb_001571_110--Hb_007894_230 Hb_000097_010 Hb_000097_010 Hb_001571_110--Hb_000097_010 Hb_140543_010 Hb_140543_010 Hb_001571_110--Hb_140543_010 Hb_002078_260 Hb_002078_260 Hb_001571_110--Hb_002078_260 Hb_001935_150 Hb_001935_150 Hb_001571_110--Hb_001935_150 Hb_001296_030 Hb_001296_030 Hb_042710_010--Hb_001296_030 Hb_000419_130 Hb_000419_130 Hb_042710_010--Hb_000419_130 Hb_042710_010--Hb_020035_020 Hb_000493_010 Hb_000493_010 Hb_042710_010--Hb_000493_010 Hb_007594_090 Hb_007594_090 Hb_042710_010--Hb_007594_090 Hb_001610_130 Hb_001610_130 Hb_042710_010--Hb_001610_130 Hb_041205_010 Hb_041205_010 Hb_098852_010--Hb_041205_010 Hb_030982_020 Hb_030982_020 Hb_098852_010--Hb_030982_020 Hb_098852_010--Hb_132180_010 Hb_098852_010--Hb_002078_260 Hb_003861_040 Hb_003861_040 Hb_098852_010--Hb_003861_040 Hb_000326_090 Hb_000326_090 Hb_098852_010--Hb_000326_090 Hb_132180_010--Hb_002078_260 Hb_001233_020 Hb_001233_020 Hb_132180_010--Hb_001233_020 Hb_000671_120 Hb_000671_120 Hb_132180_010--Hb_000671_120 Hb_004669_030 Hb_004669_030 Hb_132180_010--Hb_004669_030 Hb_000635_070 Hb_000635_070 Hb_132180_010--Hb_000635_070 Hb_001220_010 Hb_001220_010 Hb_132180_010--Hb_001220_010 Hb_000656_340 Hb_000656_340 Hb_020035_020--Hb_000656_340 Hb_020035_020--Hb_006995_040 Hb_020035_020--Hb_001610_130 Hb_020035_020--Hb_000419_130 Hb_020035_020--Hb_000493_010 Hb_182964_010 Hb_182964_010 Hb_006995_040--Hb_182964_010 Hb_000215_200 Hb_000215_200 Hb_006995_040--Hb_000215_200 Hb_006995_040--Hb_000656_340 Hb_002284_050 Hb_002284_050 Hb_006995_040--Hb_002284_050 Hb_000710_070 Hb_000710_070 Hb_006995_040--Hb_000710_070 Hb_014834_140 Hb_014834_140 Hb_006995_040--Hb_014834_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.88 9.88488 14.0625 113.638 8.29217 166.32
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
120.133 174.131 32.9911 73.0343 10.4449

CAGE analysis