Hb_182964_010

Information

Type -
Description -
Location Contig182964: 290-683
Sequence    

Annotation

kegg
ID rcu:RCOM_1308960
description acyl-CoA thioesterase, putative
nr
ID XP_012082111.1
description PREDICTED: uncharacterized protein LOC105642044 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JZL8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18347 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_182964_010 0.0 - - PREDICTED: uncharacterized protein LOC105642044 isoform X2 [Jatropha curcas]
2 Hb_006995_040 0.1002780634 - - PREDICTED: LOW QUALITY PROTEIN: 14 kDa zinc-binding protein-like [Pyrus x bretschneideri]
3 Hb_016604_030 0.1223116815 - - histone H4 [Zea mays]
4 Hb_001220_010 0.137987774 - - hypothetical protein JCGZ_00411 [Jatropha curcas]
5 Hb_007545_050 0.1384686599 - - -
6 Hb_000994_110 0.1390331708 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001754_070 0.14103574 - - hypothetical protein POPTR_0026s00250g [Populus trichocarpa]
8 Hb_000656_340 0.1472352988 - - hypothetical protein JCGZ_24686 [Jatropha curcas]
9 Hb_080601_020 0.1492784918 - - PREDICTED: cytochrome c oxidase copper chaperone 1 [Jatropha curcas]
10 Hb_132180_010 0.1506218879 - - PREDICTED: protein SPIRAL1-like 1 [Populus euphratica]
11 Hb_000215_200 0.1515781074 - - RecName: Full=Profilin-2; AltName: Full=Pollen allergen Hev b 8.0102; AltName: Allergen=Hev b 8.0102 [Hevea brasiliensis]
12 Hb_082407_010 0.1536821761 - - protein farnesyltransferase alpha subunit, putative [Ricinus communis]
13 Hb_000710_070 0.1540084597 - - PREDICTED: uncharacterized protein LOC105645553 [Jatropha curcas]
14 Hb_003994_270 0.1548269442 - - PREDICTED: uncharacterized protein LOC105646152 [Jatropha curcas]
15 Hb_000635_070 0.1562050152 - - PREDICTED: probable signal peptidase complex subunit 1 [Jatropha curcas]
16 Hb_014834_140 0.159393397 - - Uncharacterized protein TCM_015942 [Theobroma cacao]
17 Hb_001233_020 0.1595078637 - - hypothetical protein JCGZ_04109 [Jatropha curcas]
18 Hb_041205_010 0.1596391962 - - conserved hypothetical protein [Ricinus communis]
19 Hb_014834_040 0.1601089564 - - hypothetical protein JCGZ_03409 [Jatropha curcas]
20 Hb_000641_020 0.1605391331 - - PREDICTED: tubulin-folding cofactor B-like [Jatropha curcas]

Gene co-expression network

sample Hb_182964_010 Hb_182964_010 Hb_006995_040 Hb_006995_040 Hb_182964_010--Hb_006995_040 Hb_016604_030 Hb_016604_030 Hb_182964_010--Hb_016604_030 Hb_001220_010 Hb_001220_010 Hb_182964_010--Hb_001220_010 Hb_007545_050 Hb_007545_050 Hb_182964_010--Hb_007545_050 Hb_000994_110 Hb_000994_110 Hb_182964_010--Hb_000994_110 Hb_001754_070 Hb_001754_070 Hb_182964_010--Hb_001754_070 Hb_000215_200 Hb_000215_200 Hb_006995_040--Hb_000215_200 Hb_000656_340 Hb_000656_340 Hb_006995_040--Hb_000656_340 Hb_002284_050 Hb_002284_050 Hb_006995_040--Hb_002284_050 Hb_000710_070 Hb_000710_070 Hb_006995_040--Hb_000710_070 Hb_014834_140 Hb_014834_140 Hb_006995_040--Hb_014834_140 Hb_000635_070 Hb_000635_070 Hb_016604_030--Hb_000635_070 Hb_082006_010 Hb_082006_010 Hb_016604_030--Hb_082006_010 Hb_000473_020 Hb_000473_020 Hb_016604_030--Hb_000473_020 Hb_005000_330 Hb_005000_330 Hb_016604_030--Hb_005000_330 Hb_003536_110 Hb_003536_110 Hb_016604_030--Hb_003536_110 Hb_080601_020 Hb_080601_020 Hb_001220_010--Hb_080601_020 Hb_001233_020 Hb_001233_020 Hb_001220_010--Hb_001233_020 Hb_132180_010 Hb_132180_010 Hb_001220_010--Hb_132180_010 Hb_000671_120 Hb_000671_120 Hb_001220_010--Hb_000671_120 Hb_004669_030 Hb_004669_030 Hb_001220_010--Hb_004669_030 Hb_007894_230 Hb_007894_230 Hb_001220_010--Hb_007894_230 Hb_007545_050--Hb_000994_110 Hb_010504_030 Hb_010504_030 Hb_007545_050--Hb_010504_030 Hb_166480_010 Hb_166480_010 Hb_007545_050--Hb_166480_010 Hb_007545_050--Hb_006995_040 Hb_082407_010 Hb_082407_010 Hb_007545_050--Hb_082407_010 Hb_000994_110--Hb_006995_040 Hb_000994_110--Hb_014834_140 Hb_000994_110--Hb_001233_020 Hb_005367_010 Hb_005367_010 Hb_000994_110--Hb_005367_010 Hb_140543_010 Hb_140543_010 Hb_001754_070--Hb_140543_010 Hb_130235_010 Hb_130235_010 Hb_001754_070--Hb_130235_010 Hb_005667_040 Hb_005667_040 Hb_001754_070--Hb_005667_040 Hb_001158_150 Hb_001158_150 Hb_001754_070--Hb_001158_150 Hb_004125_110 Hb_004125_110 Hb_001754_070--Hb_004125_110 Hb_000326_090 Hb_000326_090 Hb_001754_070--Hb_000326_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.10045 5.20445 4.58932 25.5839 3.81391 27.3796
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
22.9992 27.8871 6.57524 4.53048 1.33939

CAGE analysis