Hb_001369_760

Information

Type -
Description -
Location Contig1369: 609618-613965
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa019417mg
description hypothetical protein
nr
ID XP_007219346.1
description hypothetical protein PRUPE_ppa019417mg [Prunus persica]
swissprot
ID -
description -
trembl
ID M5XNC4
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019417mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_10226: 613577-614262
cDNA
(Sanger)
(ID:Location)		 011_O23.ab1: 613586-614262

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001369_760 0.0 - - hypothetical protein PRUPE_ppa019417mg [Prunus persica]
2 Hb_145157_010 0.2266751987 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
3 Hb_032208_080 0.2478320228 - - PREDICTED: phytoene synthase 2, chloroplastic-like [Jatropha curcas]
4 Hb_004076_040 0.2678951758 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
5 Hb_007894_220 0.2741846473 - - PREDICTED: probable folate-biopterin transporter 4 [Jatropha curcas]
6 Hb_011639_080 0.2901786227 - - PREDICTED: LOW QUALITY PROTEIN: receptor-like protein kinase FERONIA [Populus euphratica]
7 Hb_143629_060 0.2927244799 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Jatropha curcas]
8 Hb_031139_010 0.299250335 - - PREDICTED: uncharacterized protein LOC105632403 isoform X1 [Jatropha curcas]
9 Hb_005684_010 0.3026724078 - - PREDICTED: uncharacterized protein LOC104216799 [Nicotiana sylvestris]
10 Hb_000441_060 0.3050384661 - - PREDICTED: glycolipid transfer protein [Jatropha curcas]
11 Hb_002518_120 0.305384138 - - hypothetical protein RCOM_0731250 [Ricinus communis]
12 Hb_002276_070 0.306373317 - - PREDICTED: heat shock protein 83 [Jatropha curcas]
13 Hb_158845_050 0.3071340389 - - PREDICTED: uncharacterized protein LOC105122890 [Populus euphratica]
14 Hb_000328_050 0.3073499858 - - PREDICTED: translation initiation factor IF-3, chloroplastic [Jatropha curcas]
15 Hb_093458_060 0.3074197645 - - PREDICTED: uncharacterized protein LOC105633194 [Jatropha curcas]
16 Hb_003777_250 0.3081402438 - - PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming]-like [Jatropha curcas]
17 Hb_001080_070 0.3090435483 - - 1,4-alpha-glucan branching enzyme [Manihot esculenta]
18 Hb_000056_090 0.3091311889 - - UDP-galactose transporter 3 isoform 1 [Theobroma cacao]
19 Hb_000256_200 0.3113094085 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000317_450 0.3125302947 - - PREDICTED: uncharacterized protein LOC105647032 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_001369_760 Hb_001369_760 Hb_145157_010 Hb_145157_010 Hb_001369_760--Hb_145157_010 Hb_032208_080 Hb_032208_080 Hb_001369_760--Hb_032208_080 Hb_004076_040 Hb_004076_040 Hb_001369_760--Hb_004076_040 Hb_007894_220 Hb_007894_220 Hb_001369_760--Hb_007894_220 Hb_011639_080 Hb_011639_080 Hb_001369_760--Hb_011639_080 Hb_143629_060 Hb_143629_060 Hb_001369_760--Hb_143629_060 Hb_145157_010--Hb_032208_080 Hb_161207_010 Hb_161207_010 Hb_145157_010--Hb_161207_010 Hb_032705_020 Hb_032705_020 Hb_145157_010--Hb_032705_020 Hb_000754_050 Hb_000754_050 Hb_145157_010--Hb_000754_050 Hb_004289_040 Hb_004289_040 Hb_145157_010--Hb_004289_040 Hb_006856_030 Hb_006856_030 Hb_032208_080--Hb_006856_030 Hb_032208_080--Hb_161207_010 Hb_003622_020 Hb_003622_020 Hb_032208_080--Hb_003622_020 Hb_011574_010 Hb_011574_010 Hb_032208_080--Hb_011574_010 Hb_177019_010 Hb_177019_010 Hb_004076_040--Hb_177019_010 Hb_005684_010 Hb_005684_010 Hb_004076_040--Hb_005684_010 Hb_037281_010 Hb_037281_010 Hb_004076_040--Hb_037281_010 Hb_005428_040 Hb_005428_040 Hb_004076_040--Hb_005428_040 Hb_011310_090 Hb_011310_090 Hb_004076_040--Hb_011310_090 Hb_000296_080 Hb_000296_080 Hb_007894_220--Hb_000296_080 Hb_002518_120 Hb_002518_120 Hb_007894_220--Hb_002518_120 Hb_001427_040 Hb_001427_040 Hb_007894_220--Hb_001427_040 Hb_000012_160 Hb_000012_160 Hb_007894_220--Hb_000012_160 Hb_032258_010 Hb_032258_010 Hb_007894_220--Hb_032258_010 Hb_002282_070 Hb_002282_070 Hb_007894_220--Hb_002282_070 Hb_000454_190 Hb_000454_190 Hb_011639_080--Hb_000454_190 Hb_000243_090 Hb_000243_090 Hb_011639_080--Hb_000243_090 Hb_019516_030 Hb_019516_030 Hb_011639_080--Hb_019516_030 Hb_006570_010 Hb_006570_010 Hb_011639_080--Hb_006570_010 Hb_002150_110 Hb_002150_110 Hb_011639_080--Hb_002150_110 Hb_000175_630 Hb_000175_630 Hb_011639_080--Hb_000175_630 Hb_000084_280 Hb_000084_280 Hb_143629_060--Hb_000084_280 Hb_002276_070 Hb_002276_070 Hb_143629_060--Hb_002276_070 Hb_004738_110 Hb_004738_110 Hb_143629_060--Hb_004738_110 Hb_007313_100 Hb_007313_100 Hb_143629_060--Hb_007313_100 Hb_008092_060 Hb_008092_060 Hb_143629_060--Hb_008092_060 Hb_002053_110 Hb_002053_110 Hb_143629_060--Hb_002053_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.11371 0.0724145 0.223817 0.117608
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0867702 0.0682076 0 0.055631 0.40211

CAGE analysis