Hb_000162_120

Information

Type -
Description -
Location Contig162: 158955-159284
Sequence    

Annotation

kegg
ID pop:POPTR_0004s17810g
description POPTRDRAFT_818176; hypothetical protein
nr
ID XP_012092570.1
description PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Jatropha curcas]
swissprot
ID Q9FYB5
description Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana GN=ATJ11 PE=1 SV=2
trembl
ID A0A067JCD7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06367 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000162_120 0.0 - - PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Jatropha curcas]
2 Hb_000627_260 0.1421942176 - - chloride channel clc, putative [Ricinus communis]
3 Hb_000191_080 0.1703415085 - - PREDICTED: uncharacterized protein LOC105637945 [Jatropha curcas]
4 Hb_009767_130 0.1718013017 - - PREDICTED: preprotein translocase subunit SECE1 [Jatropha curcas]
5 Hb_003813_020 0.1803491463 - - PREDICTED: uncharacterized protein LOC105638736 isoform X1 [Jatropha curcas]
6 Hb_001898_180 0.1865300916 - - PREDICTED: translation initiation factor IF-1, chloroplastic [Jatropha curcas]
7 Hb_019040_030 0.1880827518 - - PREDICTED: probable ribosome-binding factor A, chloroplastic [Jatropha curcas]
8 Hb_001712_020 0.1888000392 - - PREDICTED: uncharacterized protein LOC105641948 [Jatropha curcas]
9 Hb_001490_030 0.1891911861 - - PREDICTED: psbP domain-containing protein 6, chloroplastic [Jatropha curcas]
10 Hb_000156_210 0.1906353479 - - PREDICTED: metal transporter Nramp1 [Jatropha curcas]
11 Hb_004241_020 0.1913071655 - - PREDICTED: DAG protein, chloroplastic-like [Jatropha curcas]
12 Hb_000164_140 0.1921080289 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
13 Hb_003994_160 0.1934002771 - - PREDICTED: uncharacterized protein LOC105131691 isoform X5 [Populus euphratica]
14 Hb_007632_170 0.1937420146 - - hypothetical protein JCGZ_01028 [Jatropha curcas]
15 Hb_001790_030 0.1950394246 - - PREDICTED: ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Jatropha curcas]
16 Hb_000028_110 0.1952825423 - - PREDICTED: uncharacterized protein LOC105645305 [Jatropha curcas]
17 Hb_158845_050 0.1953087215 - - PREDICTED: uncharacterized protein LOC105122890 [Populus euphratica]
18 Hb_000300_660 0.1970334874 - - unknown [Glycine max]
19 Hb_000112_060 0.1993292069 - - PREDICTED: thioredoxin-like protein CITRX, chloroplastic [Jatropha curcas]
20 Hb_000702_080 0.200773263 - - PREDICTED: uncharacterized protein LOC105630492 [Jatropha curcas]

Gene co-expression network

sample Hb_000162_120 Hb_000162_120 Hb_000627_260 Hb_000627_260 Hb_000162_120--Hb_000627_260 Hb_000191_080 Hb_000191_080 Hb_000162_120--Hb_000191_080 Hb_009767_130 Hb_009767_130 Hb_000162_120--Hb_009767_130 Hb_003813_020 Hb_003813_020 Hb_000162_120--Hb_003813_020 Hb_001898_180 Hb_001898_180 Hb_000162_120--Hb_001898_180 Hb_019040_030 Hb_019040_030 Hb_000162_120--Hb_019040_030 Hb_001769_170 Hb_001769_170 Hb_000627_260--Hb_001769_170 Hb_000627_260--Hb_009767_130 Hb_003994_160 Hb_003994_160 Hb_000627_260--Hb_003994_160 Hb_000796_160 Hb_000796_160 Hb_000627_260--Hb_000796_160 Hb_000172_440 Hb_000172_440 Hb_000627_260--Hb_000172_440 Hb_157023_020 Hb_157023_020 Hb_000627_260--Hb_157023_020 Hb_000156_210 Hb_000156_210 Hb_000191_080--Hb_000156_210 Hb_003688_070 Hb_003688_070 Hb_000191_080--Hb_003688_070 Hb_007632_170 Hb_007632_170 Hb_000191_080--Hb_007632_170 Hb_000191_080--Hb_019040_030 Hb_000500_050 Hb_000500_050 Hb_000191_080--Hb_000500_050 Hb_000327_110 Hb_000327_110 Hb_009767_130--Hb_000327_110 Hb_001449_070 Hb_001449_070 Hb_009767_130--Hb_001449_070 Hb_000189_450 Hb_000189_450 Hb_009767_130--Hb_000189_450 Hb_009767_130--Hb_003994_160 Hb_000941_100 Hb_000941_100 Hb_009767_130--Hb_000941_100 Hb_007054_070 Hb_007054_070 Hb_009767_130--Hb_007054_070 Hb_001790_030 Hb_001790_030 Hb_003813_020--Hb_001790_030 Hb_007534_050 Hb_007534_050 Hb_003813_020--Hb_007534_050 Hb_000112_060 Hb_000112_060 Hb_003813_020--Hb_000112_060 Hb_000164_140 Hb_000164_140 Hb_003813_020--Hb_000164_140 Hb_001946_160 Hb_001946_160 Hb_003813_020--Hb_001946_160 Hb_158845_050 Hb_158845_050 Hb_003813_020--Hb_158845_050 Hb_000983_070 Hb_000983_070 Hb_001898_180--Hb_000983_070 Hb_002053_010 Hb_002053_010 Hb_001898_180--Hb_002053_010 Hb_020378_060 Hb_020378_060 Hb_001898_180--Hb_020378_060 Hb_001898_180--Hb_000189_450 Hb_001898_180--Hb_007632_170 Hb_000622_290 Hb_000622_290 Hb_001898_180--Hb_000622_290 Hb_000914_100 Hb_000914_100 Hb_019040_030--Hb_000914_100 Hb_019040_030--Hb_001898_180 Hb_019040_030--Hb_007632_170 Hb_000077_150 Hb_000077_150 Hb_019040_030--Hb_000077_150 Hb_019040_030--Hb_000156_210 Hb_001214_050 Hb_001214_050 Hb_019040_030--Hb_001214_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
15.7347 31.0317 32.8084 32.6819 13.1075 37.0886
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
41.697 92.5125 15.3463 5.41016 135.076

CAGE analysis