Hb_000327_110

Information

Type -
Description -
Location Contig327: 119023-125129
Sequence    

Annotation

kegg
ID rcu:RCOM_1071210
description hydrolase, putative
nr
ID KDP46146.1
description hypothetical protein JCGZ_06657 [Jatropha curcas]
swissprot
ID P36151
description Uncharacterized protein YKR070W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKR070W PE=1 SV=1
trembl
ID A0A067LCD4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06657 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34370: 119027-125287 , PASA_asmbl_34371: 123323-125287 , PASA_asmbl_34372: 119929-121605
cDNA
(Sanger)
(ID:Location)		 044_G03.ab1: 119027-119687

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000327_110 0.0 - - hypothetical protein JCGZ_06657 [Jatropha curcas]
2 Hb_009767_130 0.0773767771 - - PREDICTED: preprotein translocase subunit SECE1 [Jatropha curcas]
3 Hb_174865_040 0.0973530266 - - PREDICTED: crt homolog 1 isoform X2 [Jatropha curcas]
4 Hb_000172_440 0.0986781082 - - PREDICTED: NADPH-dependent 1-acyldihydroxyacetone phosphate reductase [Jatropha curcas]
5 Hb_000368_090 0.1058933291 - - TPA: hypothetical protein ZEAMMB73_442906 [Zea mays]
6 Hb_001449_070 0.1076787376 - - conserved hypothetical protein [Ricinus communis]
7 Hb_015934_120 0.1081766435 - - PREDICTED: callose synthase 7 [Vitis vinifera]
8 Hb_002232_390 0.1095269975 - - PREDICTED: uncharacterized protein LOC105635994 [Jatropha curcas]
9 Hb_000645_280 0.1113547699 - - PREDICTED: AMSH-like ubiquitin thioesterase 3 [Jatropha curcas]
10 Hb_000200_350 0.1114848385 - - PREDICTED: uncharacterized protein LOC105636929 [Jatropha curcas]
11 Hb_000613_110 0.1143674073 - - PREDICTED: uncharacterized protein LOC105641540 [Jatropha curcas]
12 Hb_000189_480 0.1164835976 - - PREDICTED: uncharacterized protein LOC105111904 isoform X2 [Populus euphratica]
13 Hb_069662_010 0.1165699428 - - PREDICTED: uncharacterized protein LOC103320051 [Prunus mume]
14 Hb_012573_050 0.1176411922 - - choline/ethanolamine kinase family protein [Populus trichocarpa]
15 Hb_000023_260 0.1190449016 - - PREDICTED: monogalactosyldiacylglycerol synthase, chloroplastic [Jatropha curcas]
16 Hb_009020_040 0.1191670551 - - PREDICTED: triacylglycerol lipase 1 isoform X1 [Jatropha curcas]
17 Hb_000684_210 0.1195114665 - - PREDICTED: uncharacterized protein LOC105642177 [Jatropha curcas]
18 Hb_001051_050 0.1201753253 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000116_130 0.1211826041 - - PREDICTED: aspartic proteinase Asp1 [Jatropha curcas]
20 Hb_000172_580 0.1218650776 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000327_110 Hb_000327_110 Hb_009767_130 Hb_009767_130 Hb_000327_110--Hb_009767_130 Hb_174865_040 Hb_174865_040 Hb_000327_110--Hb_174865_040 Hb_000172_440 Hb_000172_440 Hb_000327_110--Hb_000172_440 Hb_000368_090 Hb_000368_090 Hb_000327_110--Hb_000368_090 Hb_001449_070 Hb_001449_070 Hb_000327_110--Hb_001449_070 Hb_015934_120 Hb_015934_120 Hb_000327_110--Hb_015934_120 Hb_009767_130--Hb_001449_070 Hb_000189_450 Hb_000189_450 Hb_009767_130--Hb_000189_450 Hb_003994_160 Hb_003994_160 Hb_009767_130--Hb_003994_160 Hb_000941_100 Hb_000941_100 Hb_009767_130--Hb_000941_100 Hb_007054_070 Hb_007054_070 Hb_009767_130--Hb_007054_070 Hb_156850_100 Hb_156850_100 Hb_174865_040--Hb_156850_100 Hb_042083_040 Hb_042083_040 Hb_174865_040--Hb_042083_040 Hb_160271_010 Hb_160271_010 Hb_174865_040--Hb_160271_010 Hb_022693_130 Hb_022693_130 Hb_174865_040--Hb_022693_130 Hb_073973_120 Hb_073973_120 Hb_174865_040--Hb_073973_120 Hb_000388_150 Hb_000388_150 Hb_174865_040--Hb_000388_150 Hb_007477_050 Hb_007477_050 Hb_000172_440--Hb_007477_050 Hb_000172_440--Hb_015934_120 Hb_006683_070 Hb_006683_070 Hb_000172_440--Hb_006683_070 Hb_005800_030 Hb_005800_030 Hb_000172_440--Hb_005800_030 Hb_009661_030 Hb_009661_030 Hb_000172_440--Hb_009661_030 Hb_000368_090--Hb_174865_040 Hb_012573_050 Hb_012573_050 Hb_000368_090--Hb_012573_050 Hb_001277_100 Hb_001277_100 Hb_000368_090--Hb_001277_100 Hb_000368_090--Hb_000941_100 Hb_000368_090--Hb_156850_100 Hb_000613_110 Hb_000613_110 Hb_001449_070--Hb_000613_110 Hb_001449_070--Hb_007054_070 Hb_001449_070--Hb_000189_450 Hb_002232_390 Hb_002232_390 Hb_001449_070--Hb_002232_390 Hb_000077_150 Hb_000077_150 Hb_001449_070--Hb_000077_150 Hb_001214_050 Hb_001214_050 Hb_001449_070--Hb_001214_050 Hb_015934_120--Hb_006683_070 Hb_001314_080 Hb_001314_080 Hb_015934_120--Hb_001314_080 Hb_185255_010 Hb_185255_010 Hb_015934_120--Hb_185255_010 Hb_005144_050 Hb_005144_050 Hb_015934_120--Hb_005144_050 Hb_015934_120--Hb_005800_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.9977 0.977143 2.24662 3.72696 1.58473 2.44802
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.90681 2.10628 1.54355 0.933242 5.34976

CAGE analysis