Hb_016567_010

Information

Type -
Description -
Location Contig16567: 1421-4783
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_016567_010 0.0 - - -
2 Hb_003497_040 0.1998201238 - - ATP binding protein, putative [Ricinus communis]
3 Hb_001056_030 0.2223087252 - - PREDICTED: probable inactive purple acid phosphatase 16 isoform X2 [Jatropha curcas]
4 Hb_001401_080 0.2311892472 - - PREDICTED: protein TIC 22, chloroplastic [Jatropha curcas]
5 Hb_000008_360 0.2335722023 - - hypothetical protein POPTR_0004s22050g [Populus trichocarpa]
6 Hb_000105_050 0.2380993696 - - Inositol-tetrakisphosphate 1-kinase, putative [Ricinus communis]
7 Hb_029866_120 0.2446254858 - - hypothetical protein CICLE_v10006070mg [Citrus clementina]
8 Hb_002972_010 0.2517030367 - - PREDICTED: magnesium-dependent phosphatase 1 [Jatropha curcas]
9 Hb_158144_010 0.2531786297 - - -
10 Hb_004440_020 0.2538601615 - - AP-3 complex subunit sigma-1, putative [Ricinus communis]
11 Hb_000997_250 0.2541385785 - - PREDICTED: probable alpha-mannosidase I MNS4 [Jatropha curcas]
12 Hb_000627_260 0.2545247183 - - chloride channel clc, putative [Ricinus communis]
13 Hb_000390_110 0.2556744373 - - alpha-hydroxynitrile lyase family protein [Populus trichocarpa]
14 Hb_011330_020 0.2573079087 transcription factor TF Family: ARID transcription factor, putative [Ricinus communis]
15 Hb_012506_060 0.2581154568 - - hypothetical protein CICLE_v10029628mg [Citrus clementina]
16 Hb_122273_010 0.2584119854 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
17 Hb_000228_060 0.2593609286 - - hypothetical protein JCGZ_21532 [Jatropha curcas]
18 Hb_003077_020 0.259718824 - - ABC transporter family protein [Hevea brasiliensis]
19 Hb_001357_100 0.2604426351 - - PREDICTED: small ubiquitin-related modifier 1 [Jatropha curcas]
20 Hb_010106_010 0.2618724569 - - PREDICTED: cucumisin-like [Populus euphratica]

Gene co-expression network

sample Hb_016567_010 Hb_016567_010 Hb_003497_040 Hb_003497_040 Hb_016567_010--Hb_003497_040 Hb_001056_030 Hb_001056_030 Hb_016567_010--Hb_001056_030 Hb_001401_080 Hb_001401_080 Hb_016567_010--Hb_001401_080 Hb_000008_360 Hb_000008_360 Hb_016567_010--Hb_000008_360 Hb_000105_050 Hb_000105_050 Hb_016567_010--Hb_000105_050 Hb_029866_120 Hb_029866_120 Hb_016567_010--Hb_029866_120 Hb_028697_010 Hb_028697_010 Hb_003497_040--Hb_028697_010 Hb_032208_070 Hb_032208_070 Hb_003497_040--Hb_032208_070 Hb_001454_260 Hb_001454_260 Hb_003497_040--Hb_001454_260 Hb_148025_010 Hb_148025_010 Hb_003497_040--Hb_148025_010 Hb_000997_250 Hb_000997_250 Hb_003497_040--Hb_000997_250 Hb_011360_070 Hb_011360_070 Hb_003497_040--Hb_011360_070 Hb_011330_020 Hb_011330_020 Hb_001056_030--Hb_011330_020 Hb_000877_080 Hb_000877_080 Hb_001056_030--Hb_000877_080 Hb_000429_040 Hb_000429_040 Hb_001056_030--Hb_000429_040 Hb_000394_180 Hb_000394_180 Hb_001056_030--Hb_000394_180 Hb_002972_010 Hb_002972_010 Hb_001056_030--Hb_002972_010 Hb_000413_240 Hb_000413_240 Hb_001056_030--Hb_000413_240 Hb_006132_070 Hb_006132_070 Hb_001401_080--Hb_006132_070 Hb_001401_080--Hb_003497_040 Hb_005725_260 Hb_005725_260 Hb_001401_080--Hb_005725_260 Hb_000030_180 Hb_000030_180 Hb_001401_080--Hb_000030_180 Hb_001922_170 Hb_001922_170 Hb_001401_080--Hb_001922_170 Hb_004724_460 Hb_004724_460 Hb_001401_080--Hb_004724_460 Hb_000390_110 Hb_000390_110 Hb_000008_360--Hb_000390_110 Hb_002836_120 Hb_002836_120 Hb_000008_360--Hb_002836_120 Hb_000008_360--Hb_001056_030 Hb_140439_010 Hb_140439_010 Hb_000008_360--Hb_140439_010 Hb_000005_180 Hb_000005_180 Hb_000008_360--Hb_000005_180 Hb_010812_100 Hb_010812_100 Hb_000008_360--Hb_010812_100 Hb_000181_090 Hb_000181_090 Hb_000105_050--Hb_000181_090 Hb_001328_030 Hb_001328_030 Hb_000105_050--Hb_001328_030 Hb_004440_020 Hb_004440_020 Hb_000105_050--Hb_004440_020 Hb_002284_150 Hb_002284_150 Hb_000105_050--Hb_002284_150 Hb_003077_020 Hb_003077_020 Hb_000105_050--Hb_003077_020 Hb_000422_030 Hb_000422_030 Hb_000105_050--Hb_000422_030 Hb_001195_460 Hb_001195_460 Hb_029866_120--Hb_001195_460 Hb_000487_260 Hb_000487_260 Hb_029866_120--Hb_000487_260 Hb_013405_020 Hb_013405_020 Hb_029866_120--Hb_013405_020 Hb_029866_120--Hb_003077_020 Hb_029866_120--Hb_000413_240 Hb_000137_040 Hb_000137_040 Hb_029866_120--Hb_000137_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.734664 0.103028 0.555175 0.442924 0.0231307 0.505292
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.396181 0.890191 0.162845 0 0.633125

CAGE analysis