Hb_001056_030

Information

Type -
Description -
Location Contig1056: 21829-27558
Sequence    

Annotation

kegg
ID pop:POPTR_0016s04190g
description POPTRDRAFT_777079; calcineurin-like phosphoesterase family protein
nr
ID XP_012085947.1
description PREDICTED: probable inactive purple acid phosphatase 16 isoform X2 [Jatropha curcas]
swissprot
ID Q9SR79
description Probable inactive purple acid phosphatase 16 OS=Arabidopsis thaliana GN=PAP16 PE=2 SV=1
trembl
ID A0A067JTU4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22444 PE=4 SV=1
Gene Ontology
ID GO:0016020
description probable inactive purple acid phosphatase 16 isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01852: 21963-24539 , PASA_asmbl_01853: 24831-39101 , PASA_asmbl_01854: 24859-39101 , PASA_asmbl_01855: 26475-26819
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001056_030 0.0 - - PREDICTED: probable inactive purple acid phosphatase 16 isoform X2 [Jatropha curcas]
2 Hb_011330_020 0.0881202513 transcription factor TF Family: ARID transcription factor, putative [Ricinus communis]
3 Hb_000877_080 0.092001772 - - PREDICTED: uncharacterized protein LOC105640901 [Jatropha curcas]
4 Hb_000429_040 0.1140200724 - - PREDICTED: chaperone protein dnaJ 6 [Vitis vinifera]
5 Hb_000394_180 0.116094442 - - PREDICTED: uncharacterized protein LOC105636995 [Jatropha curcas]
6 Hb_002972_010 0.1172149985 - - PREDICTED: magnesium-dependent phosphatase 1 [Jatropha curcas]
7 Hb_000413_240 0.1187022607 - - PREDICTED: transcription factor ILR3-like isoform X2 [Jatropha curcas]
8 Hb_000599_260 0.118871902 - - Vacuolar protein sorting-associated protein 2 like 3 [Glycine soja]
9 Hb_000160_180 0.1203478722 - - methionyl-tRNA formyltransferase, putative [Ricinus communis]
10 Hb_001946_140 0.1218326386 - - PREDICTED: heme oxygenase 1, chloroplastic-like [Jatropha curcas]
11 Hb_001318_260 0.1236085948 - - PREDICTED: nitrogen regulatory protein P-II homolog [Jatropha curcas]
12 Hb_007827_010 0.1236331461 - - PREDICTED: uncharacterized protein C12B10.15c [Jatropha curcas]
13 Hb_000035_240 0.1262725125 - - conserved hypothetical protein [Ricinus communis]
14 Hb_131181_010 0.127611553 - - transcription initiation factor iia (tfiia), gamma chain, putative [Ricinus communis]
15 Hb_004093_020 0.1282050999 - - Calcium-binding EF-hand family protein [Theobroma cacao]
16 Hb_018133_020 0.1290071692 - - transporter, putative [Ricinus communis]
17 Hb_003077_020 0.1291680679 - - ABC transporter family protein [Hevea brasiliensis]
18 Hb_000365_130 0.1296105128 - - PREDICTED: uncharacterized protein LOC105649044 [Jatropha curcas]
19 Hb_001178_010 0.1309027341 - - PREDICTED: uncharacterized protein LOC105629461 [Jatropha curcas]
20 Hb_000390_090 0.1328284624 - - PREDICTED: uncharacterized protein LOC105632476 [Jatropha curcas]

Gene co-expression network

sample Hb_001056_030 Hb_001056_030 Hb_011330_020 Hb_011330_020 Hb_001056_030--Hb_011330_020 Hb_000877_080 Hb_000877_080 Hb_001056_030--Hb_000877_080 Hb_000429_040 Hb_000429_040 Hb_001056_030--Hb_000429_040 Hb_000394_180 Hb_000394_180 Hb_001056_030--Hb_000394_180 Hb_002972_010 Hb_002972_010 Hb_001056_030--Hb_002972_010 Hb_000413_240 Hb_000413_240 Hb_001056_030--Hb_000413_240 Hb_000110_250 Hb_000110_250 Hb_011330_020--Hb_000110_250 Hb_004709_010 Hb_004709_010 Hb_011330_020--Hb_004709_010 Hb_000599_260 Hb_000599_260 Hb_011330_020--Hb_000599_260 Hb_007827_010 Hb_007827_010 Hb_011330_020--Hb_007827_010 Hb_000160_180 Hb_000160_180 Hb_011330_020--Hb_000160_180 Hb_001712_020 Hb_001712_020 Hb_000877_080--Hb_001712_020 Hb_000877_080--Hb_007827_010 Hb_001318_260 Hb_001318_260 Hb_000877_080--Hb_001318_260 Hb_002872_050 Hb_002872_050 Hb_000877_080--Hb_002872_050 Hb_003349_030 Hb_003349_030 Hb_000877_080--Hb_003349_030 Hb_000832_190 Hb_000832_190 Hb_000429_040--Hb_000832_190 Hb_004041_020 Hb_004041_020 Hb_000429_040--Hb_004041_020 Hb_001377_450 Hb_001377_450 Hb_000429_040--Hb_001377_450 Hb_000429_040--Hb_000413_240 Hb_000163_100 Hb_000163_100 Hb_000429_040--Hb_000163_100 Hb_004984_030 Hb_004984_030 Hb_000429_040--Hb_004984_030 Hb_004951_060 Hb_004951_060 Hb_000394_180--Hb_004951_060 Hb_007192_030 Hb_007192_030 Hb_000394_180--Hb_007192_030 Hb_001369_790 Hb_001369_790 Hb_000394_180--Hb_001369_790 Hb_001301_340 Hb_001301_340 Hb_000394_180--Hb_001301_340 Hb_006846_150 Hb_006846_150 Hb_000394_180--Hb_006846_150 Hb_004257_010 Hb_004257_010 Hb_000394_180--Hb_004257_010 Hb_001114_160 Hb_001114_160 Hb_002972_010--Hb_001114_160 Hb_003556_030 Hb_003556_030 Hb_002972_010--Hb_003556_030 Hb_001712_070 Hb_001712_070 Hb_002972_010--Hb_001712_070 Hb_000390_090 Hb_000390_090 Hb_002972_010--Hb_000390_090 Hb_000413_060 Hb_000413_060 Hb_002972_010--Hb_000413_060 Hb_000413_240--Hb_000163_100 Hb_001863_380 Hb_001863_380 Hb_000413_240--Hb_001863_380 Hb_000413_240--Hb_000390_090 Hb_000413_240--Hb_004041_020 Hb_000413_240--Hb_000413_060 Hb_002946_190 Hb_002946_190 Hb_000413_240--Hb_002946_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.00735 1.16092 5.6997 4.12047 1.18326 2.13025
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.98077 6.85546 1.58776 1.37011 4.73297

CAGE analysis