Hb_009572_010

Information

Type -
Description -
Location Contig9572: 38504-39189
Sequence    

Annotation

kegg
ID rcu:RCOM_0393610
description hypothetical protein
nr
ID XP_012092467.1
description PREDICTED: MLP-like protein 423 [Jatropha curcas]
swissprot
ID Q93VR4
description MLP-like protein 423 OS=Arabidopsis thaliana GN=MLP423 PE=2 SV=1
trembl
ID A0A067JMT2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21786 PE=4 SV=1
Gene Ontology
ID GO:0006952
description mlp-like protein 423

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009572_010 0.0 - - PREDICTED: MLP-like protein 423 [Jatropha curcas]
2 Hb_003376_240 0.1508842199 - - conserved hypothetical protein [Ricinus communis]
3 Hb_084849_030 0.1574316113 - - PREDICTED: uncharacterized protein LOC105634080 isoform X1 [Jatropha curcas]
4 Hb_001136_050 0.1633901471 - - -
5 Hb_007594_020 0.1742017236 - - hypothetical protein JCGZ_18350 [Jatropha curcas]
6 Hb_000185_020 0.1764880289 - - -
7 Hb_174230_010 0.1810057008 - - hypothetical protein JCGZ_19971 [Jatropha curcas]
8 Hb_003053_090 0.1826344848 - - PREDICTED: carbonic anhydrase, chloroplastic-like [Jatropha curcas]
9 Hb_004150_020 0.1846334089 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
10 Hb_086691_010 0.1877550518 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
11 Hb_159308_010 0.1879972932 - - ribosomal protein S4 [Cercidiphyllum japonicum]
12 Hb_000853_280 0.1895613681 - - PREDICTED: extensin-like [Jatropha curcas]
13 Hb_015981_010 0.1898020003 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
14 Hb_159305_010 0.1908566032 - - rpl2 [Jatropha curcas]
15 Hb_007933_010 0.1914379045 - - ATP-binding cassette transporter, putative [Ricinus communis]
16 Hb_006495_030 0.1921988405 - - PREDICTED: isoflavone 2'-hydroxylase-like [Vitis vinifera]
17 Hb_011689_070 0.193630465 - - PREDICTED: pyruvate, phosphate dikinase, chloroplastic [Jatropha curcas]
18 Hb_006435_020 0.1936426694 - - sugar transporter, putative [Ricinus communis]
19 Hb_020859_010 0.1941950734 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 isoform X6 [Populus euphratica]
20 Hb_008489_030 0.1945471246 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]

Gene co-expression network

sample Hb_009572_010 Hb_009572_010 Hb_003376_240 Hb_003376_240 Hb_009572_010--Hb_003376_240 Hb_084849_030 Hb_084849_030 Hb_009572_010--Hb_084849_030 Hb_001136_050 Hb_001136_050 Hb_009572_010--Hb_001136_050 Hb_007594_020 Hb_007594_020 Hb_009572_010--Hb_007594_020 Hb_000185_020 Hb_000185_020 Hb_009572_010--Hb_000185_020 Hb_174230_010 Hb_174230_010 Hb_009572_010--Hb_174230_010 Hb_003376_240--Hb_000185_020 Hb_000504_210 Hb_000504_210 Hb_003376_240--Hb_000504_210 Hb_115572_040 Hb_115572_040 Hb_003376_240--Hb_115572_040 Hb_003376_240--Hb_007594_020 Hb_086691_010 Hb_086691_010 Hb_003376_240--Hb_086691_010 Hb_006435_020 Hb_006435_020 Hb_084849_030--Hb_006435_020 Hb_084849_030--Hb_174230_010 Hb_007741_060 Hb_007741_060 Hb_084849_030--Hb_007741_060 Hb_035265_020 Hb_035265_020 Hb_084849_030--Hb_035265_020 Hb_177343_020 Hb_177343_020 Hb_084849_030--Hb_177343_020 Hb_000648_090 Hb_000648_090 Hb_084849_030--Hb_000648_090 Hb_001136_050--Hb_174230_010 Hb_003144_010 Hb_003144_010 Hb_001136_050--Hb_003144_010 Hb_001136_050--Hb_084849_030 Hb_001195_700 Hb_001195_700 Hb_001136_050--Hb_001195_700 Hb_049187_010 Hb_049187_010 Hb_001136_050--Hb_049187_010 Hb_043327_010 Hb_043327_010 Hb_007594_020--Hb_043327_010 Hb_005171_020 Hb_005171_020 Hb_007594_020--Hb_005171_020 Hb_002997_060 Hb_002997_060 Hb_007594_020--Hb_002997_060 Hb_006272_010 Hb_006272_010 Hb_007594_020--Hb_006272_010 Hb_000504_220 Hb_000504_220 Hb_007594_020--Hb_000504_220 Hb_001089_120 Hb_001089_120 Hb_007594_020--Hb_001089_120 Hb_000185_020--Hb_086691_010 Hb_004138_020 Hb_004138_020 Hb_000185_020--Hb_004138_020 Hb_006331_010 Hb_006331_010 Hb_000185_020--Hb_006331_010 Hb_001081_070 Hb_001081_070 Hb_000185_020--Hb_001081_070 Hb_083242_040 Hb_083242_040 Hb_000185_020--Hb_083242_040 Hb_003952_030 Hb_003952_030 Hb_000185_020--Hb_003952_030 Hb_006495_030 Hb_006495_030 Hb_174230_010--Hb_006495_030 Hb_020327_010 Hb_020327_010 Hb_174230_010--Hb_020327_010 Hb_000692_240 Hb_000692_240 Hb_174230_010--Hb_000692_240 Hb_174230_010--Hb_049187_010 Hb_002040_070 Hb_002040_070 Hb_174230_010--Hb_002040_070 Hb_001511_040 Hb_001511_040 Hb_174230_010--Hb_001511_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.4131 0.152276 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.333516 0.0873598 0 0 5.18459

CAGE analysis