Hb_001136_050

Information

Type -
Description -
Location Contig1136: 47608-53193
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001136_050 0.0 - - -
2 Hb_174230_010 0.1549443128 - - hypothetical protein JCGZ_19971 [Jatropha curcas]
3 Hb_009572_010 0.1633901471 - - PREDICTED: MLP-like protein 423 [Jatropha curcas]
4 Hb_003144_010 0.1649784206 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
5 Hb_084849_030 0.1819929069 - - PREDICTED: uncharacterized protein LOC105634080 isoform X1 [Jatropha curcas]
6 Hb_001195_700 0.1937120074 - - -
7 Hb_049187_010 0.1946167318 - - hypothetical protein, partial [Pseudomonas fluorescens]
8 Hb_020327_010 0.1947280686 - - PREDICTED: uncharacterized protein LOC104886355, partial [Beta vulgaris subsp. vulgaris]
9 Hb_000692_240 0.1948964404 - - Plastocyanin A, chloroplast precursor, putative [Ricinus communis]
10 Hb_012758_010 0.196804943 - - PREDICTED: flowering-promoting factor 1-like protein 2 [Jatropha curcas]
11 Hb_002818_140 0.1968153727 - - conserved hypothetical protein [Ricinus communis]
12 Hb_005271_210 0.1973177473 - - hypothetical protein JCGZ_20628 [Jatropha curcas]
13 Hb_001511_040 0.198140598 - - PREDICTED: pistil-specific extensin-like protein [Jatropha curcas]
14 Hb_011994_050 0.1983366408 - - multicopper oxidase, putative [Ricinus communis]
15 Hb_004870_030 0.1985729509 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
16 Hb_000612_060 0.1991404312 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
17 Hb_000383_040 0.1991654693 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696607 [Phoenix dactylifera]
18 Hb_029613_010 0.1993805922 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
19 Hb_013093_010 0.1995058142 - - retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]
20 Hb_012398_020 0.1996910189 - - hypothetical protein RCOM_0641040 [Ricinus communis]

Gene co-expression network

sample Hb_001136_050 Hb_001136_050 Hb_174230_010 Hb_174230_010 Hb_001136_050--Hb_174230_010 Hb_009572_010 Hb_009572_010 Hb_001136_050--Hb_009572_010 Hb_003144_010 Hb_003144_010 Hb_001136_050--Hb_003144_010 Hb_084849_030 Hb_084849_030 Hb_001136_050--Hb_084849_030 Hb_001195_700 Hb_001195_700 Hb_001136_050--Hb_001195_700 Hb_049187_010 Hb_049187_010 Hb_001136_050--Hb_049187_010 Hb_006495_030 Hb_006495_030 Hb_174230_010--Hb_006495_030 Hb_020327_010 Hb_020327_010 Hb_174230_010--Hb_020327_010 Hb_000692_240 Hb_000692_240 Hb_174230_010--Hb_000692_240 Hb_174230_010--Hb_049187_010 Hb_002040_070 Hb_002040_070 Hb_174230_010--Hb_002040_070 Hb_001511_040 Hb_001511_040 Hb_174230_010--Hb_001511_040 Hb_003376_240 Hb_003376_240 Hb_009572_010--Hb_003376_240 Hb_009572_010--Hb_084849_030 Hb_007594_020 Hb_007594_020 Hb_009572_010--Hb_007594_020 Hb_000185_020 Hb_000185_020 Hb_009572_010--Hb_000185_020 Hb_009572_010--Hb_174230_010 Hb_001081_050 Hb_001081_050 Hb_003144_010--Hb_001081_050 Hb_184798_060 Hb_184798_060 Hb_003144_010--Hb_184798_060 Hb_003144_010--Hb_174230_010 Hb_003144_010--Hb_006495_030 Hb_003053_100 Hb_003053_100 Hb_003144_010--Hb_003053_100 Hb_006435_020 Hb_006435_020 Hb_084849_030--Hb_006435_020 Hb_084849_030--Hb_174230_010 Hb_007741_060 Hb_007741_060 Hb_084849_030--Hb_007741_060 Hb_035265_020 Hb_035265_020 Hb_084849_030--Hb_035265_020 Hb_177343_020 Hb_177343_020 Hb_084849_030--Hb_177343_020 Hb_000648_090 Hb_000648_090 Hb_084849_030--Hb_000648_090 Hb_003607_100 Hb_003607_100 Hb_001195_700--Hb_003607_100 Hb_008375_020 Hb_008375_020 Hb_001195_700--Hb_008375_020 Hb_076836_010 Hb_076836_010 Hb_001195_700--Hb_076836_010 Hb_001844_010 Hb_001844_010 Hb_001195_700--Hb_001844_010 Hb_003487_010 Hb_003487_010 Hb_001195_700--Hb_003487_010 Hb_049187_010--Hb_020327_010 Hb_049187_010--Hb_000692_240 Hb_012758_010 Hb_012758_010 Hb_049187_010--Hb_012758_010 Hb_002818_140 Hb_002818_140 Hb_049187_010--Hb_002818_140 Hb_049187_010--Hb_001511_040 Hb_005271_210 Hb_005271_210 Hb_049187_010--Hb_005271_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.130455 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.078714 0 0 0 0.858789

CAGE analysis