Hb_174230_010

Information

Type -
Description -
Location Contig174230: 5443-8678
Sequence    

Annotation

kegg
ID -
description -
nr
ID KDP27272.1
description hypothetical protein JCGZ_19971 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JTS4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19971 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_174230_010 0.0 - - hypothetical protein JCGZ_19971 [Jatropha curcas]
2 Hb_006495_030 0.0764251551 - - PREDICTED: isoflavone 2'-hydroxylase-like [Vitis vinifera]
3 Hb_020327_010 0.0794869449 - - PREDICTED: uncharacterized protein LOC104886355, partial [Beta vulgaris subsp. vulgaris]
4 Hb_000692_240 0.0795629993 - - Plastocyanin A, chloroplast precursor, putative [Ricinus communis]
5 Hb_049187_010 0.0796415315 - - hypothetical protein, partial [Pseudomonas fluorescens]
6 Hb_002040_070 0.08130402 - - -
7 Hb_001511_040 0.085132893 - - PREDICTED: pistil-specific extensin-like protein [Jatropha curcas]
8 Hb_012758_010 0.0877779994 - - PREDICTED: flowering-promoting factor 1-like protein 2 [Jatropha curcas]
9 Hb_002818_140 0.0878081389 - - conserved hypothetical protein [Ricinus communis]
10 Hb_005271_210 0.0892348114 - - hypothetical protein JCGZ_20628 [Jatropha curcas]
11 Hb_002421_170 0.0906517502 - - hypothetical protein POPTR_0003s18240g [Populus trichocarpa]
12 Hb_011994_050 0.0920049624 - - multicopper oxidase, putative [Ricinus communis]
13 Hb_004870_030 0.0926281238 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
14 Hb_005656_220 0.0926543418 - - PREDICTED: uncharacterized protein LOC105109832 [Populus euphratica]
15 Hb_000612_060 0.094099519 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
16 Hb_000383_040 0.0941636755 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696607 [Phoenix dactylifera]
17 Hb_029613_010 0.094712394 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
18 Hb_013093_010 0.0950297863 - - retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]
19 Hb_000648_090 0.0951893791 - - -
20 Hb_012398_020 0.0954965912 - - hypothetical protein RCOM_0641040 [Ricinus communis]

Gene co-expression network

sample Hb_174230_010 Hb_174230_010 Hb_006495_030 Hb_006495_030 Hb_174230_010--Hb_006495_030 Hb_020327_010 Hb_020327_010 Hb_174230_010--Hb_020327_010 Hb_000692_240 Hb_000692_240 Hb_174230_010--Hb_000692_240 Hb_049187_010 Hb_049187_010 Hb_174230_010--Hb_049187_010 Hb_002040_070 Hb_002040_070 Hb_174230_010--Hb_002040_070 Hb_001511_040 Hb_001511_040 Hb_174230_010--Hb_001511_040 Hb_006040_090 Hb_006040_090 Hb_006495_030--Hb_006040_090 Hb_003053_100 Hb_003053_100 Hb_006495_030--Hb_003053_100 Hb_006495_030--Hb_002040_070 Hb_001210_110 Hb_001210_110 Hb_006495_030--Hb_001210_110 Hb_003053_090 Hb_003053_090 Hb_006495_030--Hb_003053_090 Hb_000853_280 Hb_000853_280 Hb_006495_030--Hb_000853_280 Hb_020327_010--Hb_000692_240 Hb_020327_010--Hb_049187_010 Hb_020327_010--Hb_001511_040 Hb_012758_010 Hb_012758_010 Hb_020327_010--Hb_012758_010 Hb_002818_140 Hb_002818_140 Hb_020327_010--Hb_002818_140 Hb_005271_210 Hb_005271_210 Hb_020327_010--Hb_005271_210 Hb_000692_240--Hb_049187_010 Hb_000692_240--Hb_001511_040 Hb_002421_170 Hb_002421_170 Hb_000692_240--Hb_002421_170 Hb_000692_240--Hb_012758_010 Hb_000692_240--Hb_002818_140 Hb_049187_010--Hb_012758_010 Hb_049187_010--Hb_002818_140 Hb_049187_010--Hb_001511_040 Hb_049187_010--Hb_005271_210 Hb_005656_220 Hb_005656_220 Hb_002040_070--Hb_005656_220 Hb_002040_070--Hb_001210_110 Hb_002040_070--Hb_003053_090 Hb_027751_070 Hb_027751_070 Hb_002040_070--Hb_027751_070 Hb_020859_010 Hb_020859_010 Hb_002040_070--Hb_020859_010 Hb_001511_040--Hb_002421_170 Hb_000648_090 Hb_000648_090 Hb_001511_040--Hb_000648_090 Hb_035265_020 Hb_035265_020 Hb_001511_040--Hb_035265_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 3.15422 0.100673 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.218177 0 0 0 21.8752

CAGE analysis