Hb_005271_210

Information

Type -
Description -
Location Contig5271: 141467-141733
Sequence    

Annotation

kegg
ID pop:POPTR_0001s09050g
description POPTRDRAFT_548494; hypothetical protein
nr
ID KDP25472.1
description hypothetical protein JCGZ_20628 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JNL2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20628 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005271_210 0.0 - - hypothetical protein JCGZ_20628 [Jatropha curcas]
2 Hb_002818_140 0.0032598185 - - conserved hypothetical protein [Ricinus communis]
3 Hb_012758_010 0.0033311447 - - PREDICTED: flowering-promoting factor 1-like protein 2 [Jatropha curcas]
4 Hb_011994_050 0.0058089073 - - multicopper oxidase, putative [Ricinus communis]
5 Hb_004870_030 0.0070411634 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
6 Hb_000612_060 0.0098630513 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
7 Hb_000383_040 0.0099835193 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696607 [Phoenix dactylifera]
8 Hb_029613_010 0.0110057435 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
9 Hb_013093_010 0.0115906085 - - retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]
10 Hb_012398_020 0.0124426514 - - hypothetical protein RCOM_0641040 [Ricinus communis]
11 Hb_004557_020 0.0126957199 - - PREDICTED: L-type lectin-domain containing receptor kinase V.9-like [Jatropha curcas]
12 Hb_003007_020 0.0142147206 - - PREDICTED: uncharacterized protein LOC105629587 [Jatropha curcas]
13 Hb_034691_020 0.0147879348 - - 14 kDa proline-rich protein DC2.15 precursor, putative [Ricinus communis]
14 Hb_003608_020 0.015383931 - - hypothetical protein CISIN_1g041945mg [Citrus sinensis]
15 Hb_001060_130 0.0209231777 - - -
16 Hb_000977_230 0.0242878222 - - FT-like protein [Betula luminifera]
17 Hb_007926_030 0.0270546245 transcription factor TF Family: OFP PREDICTED: transcription repressor OFP13-like [Populus euphratica]
18 Hb_184798_050 0.0277933741 - - -
19 Hb_147503_020 0.0318819412 - - PREDICTED: uncharacterized protein LOC105641067 [Jatropha curcas]
20 Hb_006332_050 0.032387656 - - hypothetical protein POPTR_0005s07570g [Populus trichocarpa]

Gene co-expression network

sample Hb_005271_210 Hb_005271_210 Hb_002818_140 Hb_002818_140 Hb_005271_210--Hb_002818_140 Hb_012758_010 Hb_012758_010 Hb_005271_210--Hb_012758_010 Hb_011994_050 Hb_011994_050 Hb_005271_210--Hb_011994_050 Hb_004870_030 Hb_004870_030 Hb_005271_210--Hb_004870_030 Hb_000612_060 Hb_000612_060 Hb_005271_210--Hb_000612_060 Hb_000383_040 Hb_000383_040 Hb_005271_210--Hb_000383_040 Hb_002818_140--Hb_012758_010 Hb_002818_140--Hb_011994_050 Hb_002818_140--Hb_004870_030 Hb_002818_140--Hb_000612_060 Hb_002818_140--Hb_000383_040 Hb_012758_010--Hb_011994_050 Hb_012758_010--Hb_004870_030 Hb_012758_010--Hb_000612_060 Hb_012758_010--Hb_000383_040 Hb_011994_050--Hb_004870_030 Hb_011994_050--Hb_000612_060 Hb_011994_050--Hb_000383_040 Hb_029613_010 Hb_029613_010 Hb_011994_050--Hb_029613_010 Hb_013093_010 Hb_013093_010 Hb_011994_050--Hb_013093_010 Hb_004870_030--Hb_000612_060 Hb_004870_030--Hb_000383_040 Hb_004870_030--Hb_029613_010 Hb_004870_030--Hb_013093_010 Hb_012398_020 Hb_012398_020 Hb_004870_030--Hb_012398_020 Hb_000612_060--Hb_000383_040 Hb_000612_060--Hb_029613_010 Hb_000612_060--Hb_013093_010 Hb_000612_060--Hb_012398_020 Hb_004557_020 Hb_004557_020 Hb_000612_060--Hb_004557_020 Hb_000383_040--Hb_029613_010 Hb_000383_040--Hb_013093_010 Hb_000383_040--Hb_012398_020 Hb_000383_040--Hb_004557_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.220403 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 1.16138

CAGE analysis