Hb_000185_020

Information

Type -
Description -
Location Contig185: 39763-40215
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000185_020 0.0 - - -
2 Hb_086691_010 0.0874044991 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
3 Hb_004138_020 0.0942692021 - - PREDICTED: cucumisin-like [Populus euphratica]
4 Hb_006331_010 0.0945513544 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1, partial [Populus euphratica]
5 Hb_001081_070 0.0960264944 - - hypothetical protein POPTR_0001s08730g [Populus trichocarpa]
6 Hb_083242_040 0.0982687217 - - -
7 Hb_003952_030 0.1009803426 - - hypothetical protein JCGZ_16620 [Jatropha curcas]
8 Hb_001715_050 0.1020719578 - - PREDICTED: probable 2-oxoglutarate-dependent dioxygenase AOP1 [Jatropha curcas]
9 Hb_003228_060 0.1043431394 - - conserved hypothetical protein [Ricinus communis]
10 Hb_034168_060 0.1063929314 - - ribulose-1-5-bisphosphate carboxylase/oxygenase large subunit, partial (chloroplast) [Cucumis argenteus]
11 Hb_007645_040 0.109121845 - - ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Tachigali myrmecophila]
12 Hb_003477_020 0.1113653632 desease resistance Gene Name: AAA_29 PREDICTED: ABC transporter G family member 15-like [Populus euphratica]
13 Hb_000696_200 0.1114779831 - - PREDICTED: GDSL esterase/lipase EXL3-like [Jatropha curcas]
14 Hb_006272_010 0.1115696206 - - PREDICTED: cytochrome P450 86B1 [Vitis vinifera]
15 Hb_009095_020 0.1116957665 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1, partial [Populus euphratica]
16 Hb_007594_020 0.112418027 - - hypothetical protein JCGZ_18350 [Jatropha curcas]
17 Hb_048694_010 0.1157801871 - - catalytic, putative [Ricinus communis]
18 Hb_005171_020 0.1231907627 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF5.7 [Jatropha curcas]
19 Hb_103255_010 0.1282581836 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
20 Hb_183479_030 0.1291847346 - - Photosystem I reaction center subunit V, chloroplast precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000185_020 Hb_000185_020 Hb_086691_010 Hb_086691_010 Hb_000185_020--Hb_086691_010 Hb_004138_020 Hb_004138_020 Hb_000185_020--Hb_004138_020 Hb_006331_010 Hb_006331_010 Hb_000185_020--Hb_006331_010 Hb_001081_070 Hb_001081_070 Hb_000185_020--Hb_001081_070 Hb_083242_040 Hb_083242_040 Hb_000185_020--Hb_083242_040 Hb_003952_030 Hb_003952_030 Hb_000185_020--Hb_003952_030 Hb_009095_020 Hb_009095_020 Hb_086691_010--Hb_009095_020 Hb_086691_010--Hb_003952_030 Hb_026188_010 Hb_026188_010 Hb_086691_010--Hb_026188_010 Hb_086691_010--Hb_006331_010 Hb_086691_010--Hb_001081_070 Hb_003477_020 Hb_003477_020 Hb_004138_020--Hb_003477_020 Hb_007645_040 Hb_007645_040 Hb_004138_020--Hb_007645_040 Hb_004138_020--Hb_001081_070 Hb_004138_020--Hb_006331_010 Hb_034168_060 Hb_034168_060 Hb_004138_020--Hb_034168_060 Hb_004138_020--Hb_083242_040 Hb_048694_010 Hb_048694_010 Hb_006331_010--Hb_048694_010 Hb_006331_010--Hb_001081_070 Hb_006331_010--Hb_083242_040 Hb_001715_050 Hb_001715_050 Hb_006331_010--Hb_001715_050 Hb_006331_010--Hb_009095_020 Hb_002294_020 Hb_002294_020 Hb_001081_070--Hb_002294_020 Hb_001081_070--Hb_083242_040 Hb_001081_070--Hb_003477_020 Hb_001081_070--Hb_009095_020 Hb_083242_040--Hb_001715_050 Hb_003228_060 Hb_003228_060 Hb_083242_040--Hb_003228_060 Hb_000696_200 Hb_000696_200 Hb_083242_040--Hb_000696_200 Hb_006272_010 Hb_006272_010 Hb_083242_040--Hb_006272_010 Hb_005171_020 Hb_005171_020 Hb_083242_040--Hb_005171_020 Hb_083242_040--Hb_034168_060 Hb_183479_030 Hb_183479_030 Hb_003952_030--Hb_183479_030 Hb_003952_030--Hb_048694_010 Hb_003952_030--Hb_006272_010 Hb_002600_110 Hb_002600_110 Hb_003952_030--Hb_002600_110 Hb_003952_030--Hb_005171_020 Hb_003952_030--Hb_001715_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.387214 1.11941 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.26467 0 0 0 15.5869

CAGE analysis