Hb_048694_010

Information

Type -
Description -
Location Contig48694: 1549-2682
Sequence    

Annotation

kegg
ID rcu:RCOM_0840140
description catalytic, putative (EC:2.4.1.224)
nr
ID XP_002528630.1
description catalytic, putative [Ricinus communis]
swissprot
ID Q9FFN2
description Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana GN=At5g03795 PE=3 SV=2
trembl
ID B9SRL1
description Catalytic, putative OS=Ricinus communis GN=RCOM_0840140 PE=4 SV=1
Gene Ontology
ID GO:0050508
description probable glycosyltransferase at5g03795

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_44989: 769-2364
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_048694_010 0.0 - - catalytic, putative [Ricinus communis]
2 Hb_006331_010 0.0488751057 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1, partial [Populus euphratica]
3 Hb_002600_110 0.0673809642 - - hypothetical protein POPTR_0004s10540g [Populus trichocarpa]
4 Hb_183479_030 0.0679645429 - - Photosystem I reaction center subunit V, chloroplast precursor, putative [Ricinus communis]
5 Hb_006272_010 0.0692132588 - - PREDICTED: cytochrome P450 86B1 [Vitis vinifera]
6 Hb_001715_050 0.0702923131 - - PREDICTED: probable 2-oxoglutarate-dependent dioxygenase AOP1 [Jatropha curcas]
7 Hb_083242_040 0.0721851912 - - -
8 Hb_003952_030 0.0739108805 - - hypothetical protein JCGZ_16620 [Jatropha curcas]
9 Hb_009095_020 0.074325316 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1, partial [Populus euphratica]
10 Hb_001081_070 0.0784998238 - - hypothetical protein POPTR_0001s08730g [Populus trichocarpa]
11 Hb_005171_020 0.0806768158 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF5.7 [Jatropha curcas]
12 Hb_009004_020 0.0819904876 - - PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
13 Hb_003228_060 0.08281596 - - conserved hypothetical protein [Ricinus communis]
14 Hb_043327_010 0.0875458791 - - PREDICTED: uncharacterized protein LOC105785093, partial [Gossypium raimondii]
15 Hb_003947_020 0.0929070137 - - Serine/threonine-protein kinase-transforming protein raf, putative [Ricinus communis]
16 Hb_000696_200 0.0941518084 - - PREDICTED: GDSL esterase/lipase EXL3-like [Jatropha curcas]
17 Hb_002294_020 0.0947599178 - - PREDICTED: uncharacterized protein LOC105629874 [Jatropha curcas]
18 Hb_000768_080 0.0956030961 - - Mlo protein [Hevea brasiliensis]
19 Hb_001775_010 0.0995038572 - - conserved hypothetical protein [Ricinus communis]
20 Hb_034168_060 0.1001691051 - - ribulose-1-5-bisphosphate carboxylase/oxygenase large subunit, partial (chloroplast) [Cucumis argenteus]

Gene co-expression network

sample Hb_048694_010 Hb_048694_010 Hb_006331_010 Hb_006331_010 Hb_048694_010--Hb_006331_010 Hb_002600_110 Hb_002600_110 Hb_048694_010--Hb_002600_110 Hb_183479_030 Hb_183479_030 Hb_048694_010--Hb_183479_030 Hb_006272_010 Hb_006272_010 Hb_048694_010--Hb_006272_010 Hb_001715_050 Hb_001715_050 Hb_048694_010--Hb_001715_050 Hb_083242_040 Hb_083242_040 Hb_048694_010--Hb_083242_040 Hb_001081_070 Hb_001081_070 Hb_006331_010--Hb_001081_070 Hb_006331_010--Hb_083242_040 Hb_004138_020 Hb_004138_020 Hb_006331_010--Hb_004138_020 Hb_006331_010--Hb_001715_050 Hb_009095_020 Hb_009095_020 Hb_006331_010--Hb_009095_020 Hb_002600_110--Hb_183479_030 Hb_000768_080 Hb_000768_080 Hb_002600_110--Hb_000768_080 Hb_001775_010 Hb_001775_010 Hb_002600_110--Hb_001775_010 Hb_001080_290 Hb_001080_290 Hb_002600_110--Hb_001080_290 Hb_002445_020 Hb_002445_020 Hb_002600_110--Hb_002445_020 Hb_183479_030--Hb_006272_010 Hb_005171_020 Hb_005171_020 Hb_183479_030--Hb_005171_020 Hb_043327_010 Hb_043327_010 Hb_183479_030--Hb_043327_010 Hb_003952_030 Hb_003952_030 Hb_183479_030--Hb_003952_030 Hb_183479_030--Hb_001715_050 Hb_006272_010--Hb_005171_020 Hb_006272_010--Hb_001715_050 Hb_006272_010--Hb_043327_010 Hb_006272_010--Hb_083242_040 Hb_003228_060 Hb_003228_060 Hb_006272_010--Hb_003228_060 Hb_001715_050--Hb_083242_040 Hb_001715_050--Hb_003228_060 Hb_000696_200 Hb_000696_200 Hb_001715_050--Hb_000696_200 Hb_001715_050--Hb_005171_020 Hb_001715_050--Hb_043327_010 Hb_083242_040--Hb_003228_060 Hb_083242_040--Hb_000696_200 Hb_083242_040--Hb_005171_020 Hb_034168_060 Hb_034168_060 Hb_083242_040--Hb_034168_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.164211 0.766353 2.18499 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 20.9598

CAGE analysis