Hb_003952_030

Information

Type -
Description -
Location Contig3952: 35627-38164
Sequence    

Annotation

kegg
ID rcu:RCOM_0840140
description catalytic, putative (EC:2.4.1.224)
nr
ID KDP29231.1
description hypothetical protein JCGZ_16620 [Jatropha curcas]
swissprot
ID Q9FFN2
description Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana GN=At5g03795 PE=3 SV=2
trembl
ID A0A067JZ63
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16620 PE=4 SV=1
Gene Ontology
ID GO:0050508
description probable glycosyltransferase at5g03795

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_39538: 37977-38250
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003952_030 0.0 - - hypothetical protein JCGZ_16620 [Jatropha curcas]
2 Hb_183479_030 0.0544306334 - - Photosystem I reaction center subunit V, chloroplast precursor, putative [Ricinus communis]
3 Hb_048694_010 0.0739108805 - - catalytic, putative [Ricinus communis]
4 Hb_006272_010 0.0764396946 - - PREDICTED: cytochrome P450 86B1 [Vitis vinifera]
5 Hb_002600_110 0.0776334715 - - hypothetical protein POPTR_0004s10540g [Populus trichocarpa]
6 Hb_005171_020 0.0821299681 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF5.7 [Jatropha curcas]
7 Hb_001715_050 0.0847939831 - - PREDICTED: probable 2-oxoglutarate-dependent dioxygenase AOP1 [Jatropha curcas]
8 Hb_043327_010 0.0862156 - - PREDICTED: uncharacterized protein LOC105785093, partial [Gossypium raimondii]
9 Hb_007594_020 0.0894439462 - - hypothetical protein JCGZ_18350 [Jatropha curcas]
10 Hb_083242_040 0.0897474021 - - -
11 Hb_009095_020 0.0904078553 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1, partial [Populus euphratica]
12 Hb_003947_020 0.0906693426 - - Serine/threonine-protein kinase-transforming protein raf, putative [Ricinus communis]
13 Hb_006331_010 0.0909514286 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1, partial [Populus euphratica]
14 Hb_001080_290 0.0942315043 - - PSI reaction center subunit II [Citrus sinensis]
15 Hb_086691_010 0.0961651535 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
16 Hb_000940_120 0.0981868857 - - PREDICTED: proline-rich protein 4-like isoform X2 [Pyrus x bretschneideri]
17 Hb_003228_060 0.0983813 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000768_080 0.0994506092 - - Mlo protein [Hevea brasiliensis]
19 Hb_003622_050 0.1008239899 - - PREDICTED: respiratory burst oxidase homolog protein A-like [Jatropha curcas]
20 Hb_000185_020 0.1009803426 - - -

Gene co-expression network

sample Hb_003952_030 Hb_003952_030 Hb_183479_030 Hb_183479_030 Hb_003952_030--Hb_183479_030 Hb_048694_010 Hb_048694_010 Hb_003952_030--Hb_048694_010 Hb_006272_010 Hb_006272_010 Hb_003952_030--Hb_006272_010 Hb_002600_110 Hb_002600_110 Hb_003952_030--Hb_002600_110 Hb_005171_020 Hb_005171_020 Hb_003952_030--Hb_005171_020 Hb_001715_050 Hb_001715_050 Hb_003952_030--Hb_001715_050 Hb_183479_030--Hb_006272_010 Hb_183479_030--Hb_005171_020 Hb_043327_010 Hb_043327_010 Hb_183479_030--Hb_043327_010 Hb_183479_030--Hb_002600_110 Hb_183479_030--Hb_001715_050 Hb_006331_010 Hb_006331_010 Hb_048694_010--Hb_006331_010 Hb_048694_010--Hb_002600_110 Hb_048694_010--Hb_183479_030 Hb_048694_010--Hb_006272_010 Hb_048694_010--Hb_001715_050 Hb_083242_040 Hb_083242_040 Hb_048694_010--Hb_083242_040 Hb_006272_010--Hb_005171_020 Hb_006272_010--Hb_001715_050 Hb_006272_010--Hb_043327_010 Hb_006272_010--Hb_083242_040 Hb_003228_060 Hb_003228_060 Hb_006272_010--Hb_003228_060 Hb_000768_080 Hb_000768_080 Hb_002600_110--Hb_000768_080 Hb_001775_010 Hb_001775_010 Hb_002600_110--Hb_001775_010 Hb_001080_290 Hb_001080_290 Hb_002600_110--Hb_001080_290 Hb_002445_020 Hb_002445_020 Hb_002600_110--Hb_002445_020 Hb_005171_020--Hb_043327_010 Hb_005171_020--Hb_001715_050 Hb_002997_060 Hb_002997_060 Hb_005171_020--Hb_002997_060 Hb_005171_020--Hb_083242_040 Hb_005171_020--Hb_003228_060 Hb_001715_050--Hb_083242_040 Hb_001715_050--Hb_003228_060 Hb_000696_200 Hb_000696_200 Hb_001715_050--Hb_000696_200 Hb_001715_050--Hb_043327_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0437858 0.840747 2.15678 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0999825 0.0393184 0 0.0158076 17.6292

CAGE analysis