Hb_007594_020

Information

Type -
Description -
Location Contig7594: 11160-12765
Sequence    

Annotation

kegg
ID pop:POPTR_0002s15140g
description POPTRDRAFT_552079; cytochrome P450 family protein
nr
ID KDP29429.1
description hypothetical protein JCGZ_18350 [Jatropha curcas]
swissprot
ID O64636
description Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1
trembl
ID A0A067KC62
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18350 PE=3 SV=1
Gene Ontology
ID GO:0005506
description geraniol 8-hydroxylase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57186: 12624-12851
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007594_020 0.0 - - hypothetical protein JCGZ_18350 [Jatropha curcas]
2 Hb_043327_010 0.0723106451 - - PREDICTED: uncharacterized protein LOC105785093, partial [Gossypium raimondii]
3 Hb_005171_020 0.0752446515 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF5.7 [Jatropha curcas]
4 Hb_002997_060 0.0766149137 - - hypothetical protein POPTR_0011s10730g [Populus trichocarpa]
5 Hb_006272_010 0.0842221503 - - PREDICTED: cytochrome P450 86B1 [Vitis vinifera]
6 Hb_000504_220 0.0842807765 - - hypothetical protein JCGZ_10249 [Jatropha curcas]
7 Hb_001089_120 0.0882721733 - - PREDICTED: pectinesterase [Jatropha curcas]
8 Hb_003952_030 0.0894439462 - - hypothetical protein JCGZ_16620 [Jatropha curcas]
9 Hb_003251_010 0.0895528612 - - hypothetical protein MIMGU_mgv1a025126mg [Erythranthe guttata]
10 Hb_008489_030 0.0900492497 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
11 Hb_183479_030 0.0910865572 - - Photosystem I reaction center subunit V, chloroplast precursor, putative [Ricinus communis]
12 Hb_001715_050 0.0913920266 - - PREDICTED: probable 2-oxoglutarate-dependent dioxygenase AOP1 [Jatropha curcas]
13 Hb_000893_040 0.0921472128 transcription factor TF Family: bHLH hypothetical protein POPTR_0011s05320g [Populus trichocarpa]
14 Hb_003228_060 0.0939431826 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000696_200 0.0944254369 - - PREDICTED: GDSL esterase/lipase EXL3-like [Jatropha curcas]
16 Hb_083242_040 0.0973485773 - - -
17 Hb_000977_260 0.1003323413 - - hypothetical protein CISIN_1g047084mg, partial [Citrus sinensis]
18 Hb_000608_160 0.1019929922 transcription factor TF Family: GNAT N-acetyltransferase, putative [Ricinus communis]
19 Hb_003208_010 0.1019967883 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
20 Hb_015981_010 0.1049345788 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]

Gene co-expression network

sample Hb_007594_020 Hb_007594_020 Hb_043327_010 Hb_043327_010 Hb_007594_020--Hb_043327_010 Hb_005171_020 Hb_005171_020 Hb_007594_020--Hb_005171_020 Hb_002997_060 Hb_002997_060 Hb_007594_020--Hb_002997_060 Hb_006272_010 Hb_006272_010 Hb_007594_020--Hb_006272_010 Hb_000504_220 Hb_000504_220 Hb_007594_020--Hb_000504_220 Hb_001089_120 Hb_001089_120 Hb_007594_020--Hb_001089_120 Hb_043327_010--Hb_005171_020 Hb_043327_010--Hb_006272_010 Hb_043327_010--Hb_002997_060 Hb_001715_050 Hb_001715_050 Hb_043327_010--Hb_001715_050 Hb_043327_010--Hb_000504_220 Hb_183479_030 Hb_183479_030 Hb_043327_010--Hb_183479_030 Hb_005171_020--Hb_006272_010 Hb_005171_020--Hb_001715_050 Hb_005171_020--Hb_002997_060 Hb_083242_040 Hb_083242_040 Hb_005171_020--Hb_083242_040 Hb_003228_060 Hb_003228_060 Hb_005171_020--Hb_003228_060 Hb_008489_030 Hb_008489_030 Hb_002997_060--Hb_008489_030 Hb_000696_200 Hb_000696_200 Hb_002997_060--Hb_000696_200 Hb_002997_060--Hb_003228_060 Hb_000893_040 Hb_000893_040 Hb_002997_060--Hb_000893_040 Hb_006272_010--Hb_001715_050 Hb_006272_010--Hb_083242_040 Hb_006272_010--Hb_003228_060 Hb_006272_010--Hb_183479_030 Hb_000504_220--Hb_001089_120 Hb_000530_060 Hb_000530_060 Hb_000504_220--Hb_000530_060 Hb_003805_110 Hb_003805_110 Hb_000504_220--Hb_003805_110 Hb_029584_020 Hb_029584_020 Hb_000504_220--Hb_029584_020 Hb_000504_220--Hb_005171_020 Hb_001089_120--Hb_000530_060 Hb_001089_120--Hb_029584_020 Hb_000608_160 Hb_000608_160 Hb_001089_120--Hb_000608_160 Hb_003251_010 Hb_003251_010 Hb_001089_120--Hb_003251_010 Hb_001089_120--Hb_003805_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.272676 0.286996 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0350187 0 0 0 3.04114

CAGE analysis