Hb_003251_010

Information

Type -
Description -
Location Contig3251: 96944-99673
Sequence    

Annotation

kegg
ID tcc:TCM_001416
description Ankyrin repeat family protein, putative
nr
ID EYU18029.1
description hypothetical protein MIMGU_mgv1a025126mg [Erythranthe guttata]
swissprot
ID -
description -
trembl
ID A0A022PRC0
description Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a025126mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34264: 99029-102670
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003251_010 0.0 - - hypothetical protein MIMGU_mgv1a025126mg [Erythranthe guttata]
2 Hb_003208_010 0.0186427422 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
3 Hb_000977_260 0.0232154197 - - hypothetical protein CISIN_1g047084mg, partial [Citrus sinensis]
4 Hb_000893_040 0.0369344737 transcription factor TF Family: bHLH hypothetical protein POPTR_0011s05320g [Populus trichocarpa]
5 Hb_000282_110 0.0478594787 transcription factor TF Family: C2C2-GATA hypothetical protein POPTR_0006s24560g [Populus trichocarpa]
6 Hb_008489_030 0.0483500796 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
7 Hb_000398_110 0.0497296165 transcription factor TF Family: zf-HD PREDICTED: zinc-finger homeodomain protein 4-like [Populus euphratica]
8 Hb_001089_120 0.0592379157 - - PREDICTED: pectinesterase [Jatropha curcas]
9 Hb_013818_020 0.0596522528 - - hypothetical protein POPTR_0005s21070g [Populus trichocarpa]
10 Hb_020805_090 0.0608606724 - - glyceraldehyde 3-phosphate dehydrogenase, putative [Ricinus communis]
11 Hb_004855_030 0.0617027617 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
12 Hb_002997_060 0.0620071749 - - hypothetical protein POPTR_0011s10730g [Populus trichocarpa]
13 Hb_020859_010 0.0651904422 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 isoform X6 [Populus euphratica]
14 Hb_007416_250 0.0665841304 - - -
15 Hb_015981_010 0.0679930443 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
16 Hb_013405_240 0.0698030927 - - Hydroxyproline-rich glycoprotein family protein [Theobroma cacao]
17 Hb_000083_010 0.0709240997 - - -
18 Hb_027751_070 0.07299625 transcription factor TF Family: C2C2-CO-like transcription factor, putative [Ricinus communis]
19 Hb_000504_220 0.0756165158 - - hypothetical protein JCGZ_10249 [Jatropha curcas]
20 Hb_004150_020 0.0756694768 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]

Gene co-expression network

sample Hb_003251_010 Hb_003251_010 Hb_003208_010 Hb_003208_010 Hb_003251_010--Hb_003208_010 Hb_000977_260 Hb_000977_260 Hb_003251_010--Hb_000977_260 Hb_000893_040 Hb_000893_040 Hb_003251_010--Hb_000893_040 Hb_000282_110 Hb_000282_110 Hb_003251_010--Hb_000282_110 Hb_008489_030 Hb_008489_030 Hb_003251_010--Hb_008489_030 Hb_000398_110 Hb_000398_110 Hb_003251_010--Hb_000398_110 Hb_003208_010--Hb_000977_260 Hb_003208_010--Hb_000282_110 Hb_003208_010--Hb_000398_110 Hb_013818_020 Hb_013818_020 Hb_003208_010--Hb_013818_020 Hb_003208_010--Hb_000893_040 Hb_000977_260--Hb_000893_040 Hb_000977_260--Hb_000398_110 Hb_000977_260--Hb_008489_030 Hb_020859_010 Hb_020859_010 Hb_000977_260--Hb_020859_010 Hb_000893_040--Hb_008489_030 Hb_015981_010 Hb_015981_010 Hb_000893_040--Hb_015981_010 Hb_000893_040--Hb_020859_010 Hb_002997_060 Hb_002997_060 Hb_000893_040--Hb_002997_060 Hb_000282_110--Hb_013818_020 Hb_007416_250 Hb_007416_250 Hb_000282_110--Hb_007416_250 Hb_013405_240 Hb_013405_240 Hb_000282_110--Hb_013405_240 Hb_000762_050 Hb_000762_050 Hb_000282_110--Hb_000762_050 Hb_008489_030--Hb_015981_010 Hb_008489_030--Hb_002997_060 Hb_008489_030--Hb_020859_010 Hb_000083_010 Hb_000083_010 Hb_000398_110--Hb_000083_010 Hb_027751_070 Hb_027751_070 Hb_000398_110--Hb_027751_070 Hb_000398_110--Hb_000282_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0324528 0.0185923 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.239829

CAGE analysis