Hb_084849_030

Information

Type -
Description -
Location Contig84849: 33362-37004
Sequence    

Annotation

kegg
ID rcu:RCOM_0630070
description phosphoglucomutase, putative (EC:5.4.2.8)
nr
ID XP_012072246.1
description PREDICTED: uncharacterized protein LOC105634080 isoform X1 [Jatropha curcas]
swissprot
ID Q88BD4
description Phosphomannomutase/phosphoglucomutase OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=algC PE=3 SV=1
trembl
ID B9SP81
description Phosphoglucomutase, putative OS=Ricinus communis GN=RCOM_0630070 PE=4 SV=1
Gene Ontology
ID GO:0009570
description phosphoglucomutase glucose

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_60268: 35486-36076
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_084849_030 0.0 - - PREDICTED: uncharacterized protein LOC105634080 isoform X1 [Jatropha curcas]
2 Hb_006435_020 0.1168875768 - - sugar transporter, putative [Ricinus communis]
3 Hb_174230_010 0.1215319967 - - hypothetical protein JCGZ_19971 [Jatropha curcas]
4 Hb_007741_060 0.1277930902 - - PREDICTED: putative lipid-binding protein At4g00165 [Jatropha curcas]
5 Hb_035265_020 0.1297515186 - - ankyrin repeat-containing protein, putative [Ricinus communis]
6 Hb_177343_020 0.1302189361 - - PREDICTED: uncharacterized protein LOC104751876 [Camelina sativa]
7 Hb_000648_090 0.1304746582 - - -
8 Hb_000627_060 0.1305711934 - - -
9 Hb_004643_030 0.1309365657 - - conserved hypothetical protein [Ricinus communis]
10 Hb_004567_080 0.1309450391 - - Xyloglucan endotransglucosylase/hydrolase protein 2 precursor, putative [Ricinus communis]
11 Hb_002421_170 0.1317113318 - - hypothetical protein POPTR_0003s18240g [Populus trichocarpa]
12 Hb_004811_010 0.1328828248 - - DNA-directed RNA polymerase subunit beta, partial [Medicago truncatula]
13 Hb_002093_010 0.1338157256 - - PREDICTED: non-symbiotic hemoglobin 2 [Jatropha curcas]
14 Hb_001511_040 0.1345866839 - - PREDICTED: pistil-specific extensin-like protein [Jatropha curcas]
15 Hb_006495_030 0.1384559324 - - PREDICTED: isoflavone 2'-hydroxylase-like [Vitis vinifera]
16 Hb_002276_110 0.1388054182 - - protein binding protein, putative [Ricinus communis]
17 Hb_033623_030 0.1398213172 - - PREDICTED: isoprene synthase, chloroplastic-like isoform X1 [Jatropha curcas]
18 Hb_059280_010 0.1398430162 - - hypothetical protein POPTR_0019s02860g [Populus trichocarpa]
19 Hb_002704_090 0.1411649494 - - cytochrome P450, putative [Ricinus communis]
20 Hb_007933_010 0.1421641368 - - ATP-binding cassette transporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_084849_030 Hb_084849_030 Hb_006435_020 Hb_006435_020 Hb_084849_030--Hb_006435_020 Hb_174230_010 Hb_174230_010 Hb_084849_030--Hb_174230_010 Hb_007741_060 Hb_007741_060 Hb_084849_030--Hb_007741_060 Hb_035265_020 Hb_035265_020 Hb_084849_030--Hb_035265_020 Hb_177343_020 Hb_177343_020 Hb_084849_030--Hb_177343_020 Hb_000648_090 Hb_000648_090 Hb_084849_030--Hb_000648_090 Hb_000627_060 Hb_000627_060 Hb_006435_020--Hb_000627_060 Hb_006435_020--Hb_007741_060 Hb_002093_010 Hb_002093_010 Hb_006435_020--Hb_002093_010 Hb_002704_090 Hb_002704_090 Hb_006435_020--Hb_002704_090 Hb_004567_080 Hb_004567_080 Hb_006435_020--Hb_004567_080 Hb_004643_030 Hb_004643_030 Hb_006435_020--Hb_004643_030 Hb_006495_030 Hb_006495_030 Hb_174230_010--Hb_006495_030 Hb_020327_010 Hb_020327_010 Hb_174230_010--Hb_020327_010 Hb_000692_240 Hb_000692_240 Hb_174230_010--Hb_000692_240 Hb_049187_010 Hb_049187_010 Hb_174230_010--Hb_049187_010 Hb_002040_070 Hb_002040_070 Hb_174230_010--Hb_002040_070 Hb_001511_040 Hb_001511_040 Hb_174230_010--Hb_001511_040 Hb_007741_060--Hb_000627_060 Hb_007741_060--Hb_002093_010 Hb_007741_060--Hb_177343_020 Hb_007741_060--Hb_004643_030 Hb_007741_060--Hb_004567_080 Hb_035265_020--Hb_000648_090 Hb_035265_020--Hb_177343_020 Hb_002421_170 Hb_002421_170 Hb_035265_020--Hb_002421_170 Hb_035265_020--Hb_004643_030 Hb_035265_020--Hb_004567_080 Hb_035265_020--Hb_001511_040 Hb_177343_020--Hb_004643_030 Hb_177343_020--Hb_004567_080 Hb_177343_020--Hb_000648_090 Hb_177343_020--Hb_002421_170 Hb_000648_090--Hb_002421_170 Hb_000648_090--Hb_001511_040 Hb_000648_090--Hb_004643_030 Hb_000648_090--Hb_004567_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0778327 0 0.77749 0.0144621 0.0176852 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.128768 0.10132 0 0 9.11222

CAGE analysis