Hb_002093_010

Information

Type -
Description -
Location Contig2093: 16138-17341
Sequence    

Annotation

kegg
ID bvg:104888042
description non-symbiotic hemoglobin 2
nr
ID XP_012090358.1
description PREDICTED: non-symbiotic hemoglobin 2 [Jatropha curcas]
swissprot
ID Q941P9
description Non-symbiotic hemoglobin 2 OS=Solanum lycopersicum GN=HB2 PE=2 SV=1
trembl
ID A0A067LCU3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01563 PE=3 SV=1
Gene Ontology
ID GO:0005737
description non-symbiotic hemoglobin 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_21649: 16165-17497
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002093_010 0.0 - - PREDICTED: non-symbiotic hemoglobin 2 [Jatropha curcas]
2 Hb_000627_060 0.0153980024 - - -
3 Hb_002704_090 0.022569932 - - cytochrome P450, putative [Ricinus communis]
4 Hb_007741_060 0.0294702061 - - PREDICTED: putative lipid-binding protein At4g00165 [Jatropha curcas]
5 Hb_007933_010 0.0349207271 - - ATP-binding cassette transporter, putative [Ricinus communis]
6 Hb_006435_020 0.0357769787 - - sugar transporter, putative [Ricinus communis]
7 Hb_003120_090 0.0431175073 - - PREDICTED: uncharacterized protein LOC100264374 [Vitis vinifera]
8 Hb_000853_280 0.0459081758 - - PREDICTED: extensin-like [Jatropha curcas]
9 Hb_004567_080 0.0551408413 - - Xyloglucan endotransglucosylase/hydrolase protein 2 precursor, putative [Ricinus communis]
10 Hb_004643_030 0.0551528091 - - conserved hypothetical protein [Ricinus communis]
11 Hb_005018_050 0.055259859 - - PREDICTED: licodione synthase-like [Jatropha curcas]
12 Hb_177343_020 0.0567376537 - - PREDICTED: uncharacterized protein LOC104751876 [Camelina sativa]
13 Hb_002276_110 0.0581247876 - - protein binding protein, putative [Ricinus communis]
14 Hb_059280_010 0.0592344982 - - hypothetical protein POPTR_0019s02860g [Populus trichocarpa]
15 Hb_031194_030 0.0592752344 - - ribulose 1,5-bisphosphate carboxylase/oxygenase [Stackhousia minima]
16 Hb_007219_010 0.0624483377 - - -
17 Hb_035265_020 0.0628753562 - - ankyrin repeat-containing protein, putative [Ricinus communis]
18 Hb_003407_050 0.0676659877 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
19 Hb_000648_090 0.0690059174 - - -
20 Hb_002421_170 0.0747783758 - - hypothetical protein POPTR_0003s18240g [Populus trichocarpa]

Gene co-expression network

sample Hb_002093_010 Hb_002093_010 Hb_000627_060 Hb_000627_060 Hb_002093_010--Hb_000627_060 Hb_002704_090 Hb_002704_090 Hb_002093_010--Hb_002704_090 Hb_007741_060 Hb_007741_060 Hb_002093_010--Hb_007741_060 Hb_007933_010 Hb_007933_010 Hb_002093_010--Hb_007933_010 Hb_006435_020 Hb_006435_020 Hb_002093_010--Hb_006435_020 Hb_003120_090 Hb_003120_090 Hb_002093_010--Hb_003120_090 Hb_000627_060--Hb_007741_060 Hb_000627_060--Hb_006435_020 Hb_000627_060--Hb_002704_090 Hb_004567_080 Hb_004567_080 Hb_000627_060--Hb_004567_080 Hb_004643_030 Hb_004643_030 Hb_000627_060--Hb_004643_030 Hb_002704_090--Hb_003120_090 Hb_005018_050 Hb_005018_050 Hb_002704_090--Hb_005018_050 Hb_002704_090--Hb_007933_010 Hb_031194_030 Hb_031194_030 Hb_002704_090--Hb_031194_030 Hb_007741_060--Hb_006435_020 Hb_177343_020 Hb_177343_020 Hb_007741_060--Hb_177343_020 Hb_007741_060--Hb_004643_030 Hb_007741_060--Hb_004567_080 Hb_000853_280 Hb_000853_280 Hb_007933_010--Hb_000853_280 Hb_007933_010--Hb_003120_090 Hb_007933_010--Hb_000627_060 Hb_007933_010--Hb_005018_050 Hb_006435_020--Hb_002704_090 Hb_006435_020--Hb_004567_080 Hb_006435_020--Hb_004643_030 Hb_003120_090--Hb_005018_050 Hb_003407_050 Hb_003407_050 Hb_003120_090--Hb_003407_050 Hb_003120_090--Hb_031194_030 Hb_003120_090--Hb_000853_280
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 5.56909 0.533245 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 85.1167

CAGE analysis