Hb_005018_050

Information

Type -
Description -
Location Contig5018: 94393-96778
Sequence    

Annotation

kegg
ID rcu:RCOM_0787730
description cytochrome P450, putative (EC:1.14.13.87)
nr
ID XP_012064961.1
description PREDICTED: licodione synthase-like [Jatropha curcas]
swissprot
ID P93149
description Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2
trembl
ID A0A067LIV1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05646 PE=3 SV=1
Gene Ontology
ID GO:0004497
description licodione synthase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005018_050 0.0 - - PREDICTED: licodione synthase-like [Jatropha curcas]
2 Hb_003407_050 0.019896328 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
3 Hb_003120_090 0.0206497184 - - PREDICTED: uncharacterized protein LOC100264374 [Vitis vinifera]
4 Hb_031194_030 0.0371941414 - - ribulose 1,5-bisphosphate carboxylase/oxygenase [Stackhousia minima]
5 Hb_002704_090 0.0394662172 - - cytochrome P450, putative [Ricinus communis]
6 Hb_007933_010 0.0517864627 - - ATP-binding cassette transporter, putative [Ricinus communis]
7 Hb_088080_010 0.0541551967 - - photosystem I P700 chlorophyll a apoprotein A1 [Matelea biflora]
8 Hb_002093_010 0.055259859 - - PREDICTED: non-symbiotic hemoglobin 2 [Jatropha curcas]
9 Hb_000853_280 0.0577833905 - - PREDICTED: extensin-like [Jatropha curcas]
10 Hb_007595_030 0.0581646631 - - psbA gene product (chloroplast) [Silene noctiflora]
11 Hb_126973_010 0.0601438133 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g34110 [Vitis vinifera]
12 Hb_000938_050 0.06239392 - - hypothetical protein JCGZ_09640 [Jatropha curcas]
13 Hb_002835_420 0.0675124461 - - photosystem I P700 chlorophyll A apoprotein A2 [Medicago truncatula]
14 Hb_000627_060 0.0677189663 - - -
15 Hb_154980_010 0.0715636303 - - photosystem I P700 chlorophyll A apoprotein A2 [Medicago truncatula]
16 Hb_007645_050 0.0727410368 - - acetyl-CoA carboxylase beta subunit [Hevea brasiliensis]
17 Hb_106850_010 0.0729157781 - - photosystem II protein D2 [Lactuca sativa]
18 Hb_006435_020 0.0742796506 - - sugar transporter, putative [Ricinus communis]
19 Hb_003963_030 0.0813283266 - - psbB [Jatropha curcas]
20 Hb_007645_040 0.0819340077 - - ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Tachigali myrmecophila]

Gene co-expression network

sample Hb_005018_050 Hb_005018_050 Hb_003407_050 Hb_003407_050 Hb_005018_050--Hb_003407_050 Hb_003120_090 Hb_003120_090 Hb_005018_050--Hb_003120_090 Hb_031194_030 Hb_031194_030 Hb_005018_050--Hb_031194_030 Hb_002704_090 Hb_002704_090 Hb_005018_050--Hb_002704_090 Hb_007933_010 Hb_007933_010 Hb_005018_050--Hb_007933_010 Hb_088080_010 Hb_088080_010 Hb_005018_050--Hb_088080_010 Hb_003407_050--Hb_003120_090 Hb_003407_050--Hb_031194_030 Hb_003407_050--Hb_002704_090 Hb_003407_050--Hb_088080_010 Hb_007595_030 Hb_007595_030 Hb_003407_050--Hb_007595_030 Hb_003120_090--Hb_002704_090 Hb_003120_090--Hb_007933_010 Hb_003120_090--Hb_031194_030 Hb_000853_280 Hb_000853_280 Hb_003120_090--Hb_000853_280 Hb_031194_030--Hb_088080_010 Hb_031194_030--Hb_007595_030 Hb_031194_030--Hb_002704_090 Hb_002093_010 Hb_002093_010 Hb_002704_090--Hb_002093_010 Hb_000627_060 Hb_000627_060 Hb_002704_090--Hb_000627_060 Hb_002704_090--Hb_007933_010 Hb_007933_010--Hb_000853_280 Hb_007933_010--Hb_002093_010 Hb_007933_010--Hb_000627_060 Hb_088080_010--Hb_007595_030 Hb_007645_050 Hb_007645_050 Hb_088080_010--Hb_007645_050 Hb_003963_030 Hb_003963_030 Hb_088080_010--Hb_003963_030 Hb_088080_010--Hb_003120_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 4.71419 1.6953 0 0.0126592
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0290652 0 0 0 107.91

CAGE analysis