Hb_013253_030

Information

Type -
Description -
Location Contig13253: 21455-26817
Sequence    

Annotation

kegg
ID vvi:100243183
description protein argonaute 16
nr
ID XP_012080654.1
description PREDICTED: protein argonaute 16 isoform X1 [Jatropha curcas]
swissprot
ID Q6YSJ5
description Protein argonaute 16 OS=Oryza sativa subsp. japonica GN=AGO16 PE=2 SV=2
trembl
ID A0A067K3M5
description Protein argonaute OS=Jatropha curcas GN=JCGZ_13759 PE=3 SV=1
Gene Ontology
ID GO:0003676
description protein argonaute 16 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_013253_030 0.0 - - PREDICTED: protein argonaute 16 isoform X1 [Jatropha curcas]
2 Hb_000043_100 0.1875344697 - - PREDICTED: uncharacterized protein LOC105797583 [Gossypium raimondii]
3 Hb_158235_010 0.2115744634 - - PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
4 Hb_000445_200 0.2349048966 - - PREDICTED: uncharacterized protein LOC105650390, partial [Jatropha curcas]
5 Hb_009572_010 0.2403192329 - - PREDICTED: MLP-like protein 423 [Jatropha curcas]
6 Hb_000816_220 0.2429536415 - - PREDICTED: CBL-interacting protein kinase 18-like [Jatropha curcas]
7 Hb_000329_580 0.2441778277 - - malate dehydrogenase, putative [Ricinus communis]
8 Hb_004545_010 0.2456622732 - - acyl carrier protein [Ricinus communis]
9 Hb_007479_030 0.2472528886 - - PREDICTED: asparagine synthetase [glutamine-hydrolyzing] 3 [Jatropha curcas]
10 Hb_000184_030 0.2517733633 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Jatropha curcas]
11 Hb_003376_240 0.254746585 - - conserved hypothetical protein [Ricinus communis]
12 Hb_019845_010 0.2561107658 - - protease inhibitor protein [Hevea brasiliensis]
13 Hb_000329_520 0.2592562124 - - PREDICTED: metalloendoproteinase 1 [Jatropha curcas]
14 Hb_001519_020 0.2663549247 - - hypothetical protein JCGZ_09913 [Jatropha curcas]
15 Hb_000367_140 0.266355528 - - S-locus-specific glycoprotein S6 precursor, putative [Ricinus communis]
16 Hb_000387_090 0.2757128878 - - PREDICTED: uncharacterized protein LOC104115978 [Nicotiana tomentosiformis]
17 Hb_161207_010 0.2824103469 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
18 Hb_003336_020 0.2827919599 - - PREDICTED: probable sodium/metabolite cotransporter BASS3, chloroplastic [Vitis vinifera]
19 Hb_009771_080 0.2860001137 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
20 Hb_000062_520 0.2876999869 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_013253_030 Hb_013253_030 Hb_000043_100 Hb_000043_100 Hb_013253_030--Hb_000043_100 Hb_158235_010 Hb_158235_010 Hb_013253_030--Hb_158235_010 Hb_000445_200 Hb_000445_200 Hb_013253_030--Hb_000445_200 Hb_009572_010 Hb_009572_010 Hb_013253_030--Hb_009572_010 Hb_000816_220 Hb_000816_220 Hb_013253_030--Hb_000816_220 Hb_000329_580 Hb_000329_580 Hb_013253_030--Hb_000329_580 Hb_000043_100--Hb_158235_010 Hb_000043_100--Hb_009572_010 Hb_000329_520 Hb_000329_520 Hb_000043_100--Hb_000329_520 Hb_000367_140 Hb_000367_140 Hb_000043_100--Hb_000367_140 Hb_000043_100--Hb_000816_220 Hb_001519_020 Hb_001519_020 Hb_158235_010--Hb_001519_020 Hb_001344_030 Hb_001344_030 Hb_158235_010--Hb_001344_030 Hb_003020_290 Hb_003020_290 Hb_158235_010--Hb_003020_290 Hb_005496_100 Hb_005496_100 Hb_158235_010--Hb_005496_100 Hb_000387_090 Hb_000387_090 Hb_000445_200--Hb_000387_090 Hb_000184_030 Hb_000184_030 Hb_000445_200--Hb_000184_030 Hb_007479_030 Hb_007479_030 Hb_000445_200--Hb_007479_030 Hb_000445_200--Hb_000367_140 Hb_001623_600 Hb_001623_600 Hb_000445_200--Hb_001623_600 Hb_003376_240 Hb_003376_240 Hb_009572_010--Hb_003376_240 Hb_084849_030 Hb_084849_030 Hb_009572_010--Hb_084849_030 Hb_001136_050 Hb_001136_050 Hb_009572_010--Hb_001136_050 Hb_007594_020 Hb_007594_020 Hb_009572_010--Hb_007594_020 Hb_000185_020 Hb_000185_020 Hb_009572_010--Hb_000185_020 Hb_174230_010 Hb_174230_010 Hb_009572_010--Hb_174230_010 Hb_000816_220--Hb_000329_520 Hb_159305_010 Hb_159305_010 Hb_000816_220--Hb_159305_010 Hb_000699_080 Hb_000699_080 Hb_000816_220--Hb_000699_080 Hb_003336_020 Hb_003336_020 Hb_000816_220--Hb_003336_020 Hb_000120_900 Hb_000120_900 Hb_000816_220--Hb_000120_900 Hb_000816_220--Hb_007479_030 Hb_019613_010 Hb_019613_010 Hb_000329_580--Hb_019613_010 Hb_003261_010 Hb_003261_010 Hb_000329_580--Hb_003261_010 Hb_002968_050 Hb_002968_050 Hb_000329_580--Hb_002968_050 Hb_001213_110 Hb_001213_110 Hb_000329_580--Hb_001213_110 Hb_000200_360 Hb_000200_360 Hb_000329_580--Hb_000200_360 Hb_011053_020 Hb_011053_020 Hb_000329_580--Hb_011053_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0116091 0.0103948 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0168839 0.0132859 0 0 0.0848009

CAGE analysis