Hb_075722_010

Information

Type -
Description -
Location Contig75722: 77-582
Sequence    

Annotation

kegg
ID brp:103848430
description DNA-binding protein HEXBP-like
nr
ID KDP22750.1
description hypothetical protein JCGZ_01984 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JRZ3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01984 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_075722_010 0.0 - - hypothetical protein JCGZ_01984 [Jatropha curcas]
2 Hb_000351_150 0.2206513514 - - Wall-associated kinase 2, putative [Theobroma cacao]
3 Hb_056550_010 0.2219568396 - - PREDICTED: uncharacterized protein LOC104112577 [Nicotiana tomentosiformis]
4 Hb_038508_010 0.2363969192 - - PREDICTED: uncharacterized protein LOC105638675 [Jatropha curcas]
5 Hb_000155_240 0.2405629122 - - PREDICTED: uncharacterized protein LOC104888642 [Beta vulgaris subsp. vulgaris]
6 Hb_087426_010 0.2528086093 - - PREDICTED: uncharacterized protein LOC105803348 [Gossypium raimondii]
7 Hb_000789_140 0.2539389806 - - PREDICTED: uncharacterized protein LOC105650390, partial [Jatropha curcas]
8 Hb_092855_030 0.2730665752 - - -
9 Hb_008408_050 0.2773501309 - - -
10 Hb_000089_050 0.2857378436 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
11 Hb_004018_010 0.2954674601 - - PREDICTED: uncharacterized protein LOC105784835 [Gossypium raimondii]
12 Hb_008727_130 0.3090294569 - - hypothetical protein EUGRSUZ_J01958 [Eucalyptus grandis]
13 Hb_000709_020 0.314347115 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
14 Hb_009152_030 0.3151470591 - - hypothetical protein L484_026849 [Morus notabilis]
15 Hb_012235_010 0.3271560674 - - PREDICTED: uncharacterized protein LOC104094989 [Nicotiana tomentosiformis]
16 Hb_016354_010 0.330991406 - - -
17 Hb_079902_030 0.3348699194 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000098_090 0.3396462906 - - PREDICTED: uncharacterized protein LOC105640313 [Jatropha curcas]
19 Hb_163663_010 0.3400996507 - - PREDICTED: uncharacterized protein LOC105629934 [Jatropha curcas]
20 Hb_002042_240 0.3424846043 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]

Gene co-expression network

sample Hb_075722_010 Hb_075722_010 Hb_000351_150 Hb_000351_150 Hb_075722_010--Hb_000351_150 Hb_056550_010 Hb_056550_010 Hb_075722_010--Hb_056550_010 Hb_038508_010 Hb_038508_010 Hb_075722_010--Hb_038508_010 Hb_000155_240 Hb_000155_240 Hb_075722_010--Hb_000155_240 Hb_087426_010 Hb_087426_010 Hb_075722_010--Hb_087426_010 Hb_000789_140 Hb_000789_140 Hb_075722_010--Hb_000789_140 Hb_000351_150--Hb_056550_010 Hb_000351_150--Hb_087426_010 Hb_004018_010 Hb_004018_010 Hb_000351_150--Hb_004018_010 Hb_000709_020 Hb_000709_020 Hb_000351_150--Hb_000709_020 Hb_163663_010 Hb_163663_010 Hb_000351_150--Hb_163663_010 Hb_056550_010--Hb_087426_010 Hb_056550_010--Hb_004018_010 Hb_056550_010--Hb_000709_020 Hb_056550_010--Hb_163663_010 Hb_038508_010--Hb_000155_240 Hb_038508_010--Hb_000789_140 Hb_009152_030 Hb_009152_030 Hb_038508_010--Hb_009152_030 Hb_012235_010 Hb_012235_010 Hb_038508_010--Hb_012235_010 Hb_016354_010 Hb_016354_010 Hb_038508_010--Hb_016354_010 Hb_079902_030 Hb_079902_030 Hb_038508_010--Hb_079902_030 Hb_000155_240--Hb_000789_140 Hb_000155_240--Hb_009152_030 Hb_031866_030 Hb_031866_030 Hb_000155_240--Hb_031866_030 Hb_002060_040 Hb_002060_040 Hb_000155_240--Hb_002060_040 Hb_033066_030 Hb_033066_030 Hb_000155_240--Hb_033066_030 Hb_087426_010--Hb_000709_020 Hb_087426_010--Hb_163663_010 Hb_087426_010--Hb_004018_010 Hb_000101_280 Hb_000101_280 Hb_087426_010--Hb_000101_280 Hb_000789_140--Hb_009152_030 Hb_000789_140--Hb_031866_030 Hb_000789_140--Hb_002060_040 Hb_000789_140--Hb_033066_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.284102 0 0 0 0 0.0716965
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.062442 0.260669

CAGE analysis