Hb_000351_150

Information

Type -
Description -
Location Contig351: 162010-165138
Sequence    

Annotation

kegg
ID tcc:TCM_035258
description Wall-associated kinase 2, putative
nr
ID XP_007019259.1
description Wall-associated kinase 2, putative [Theobroma cacao]
swissprot
ID Q9LMP1
description Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1
trembl
ID A0A061FPM4
description Wall-associated kinase 2, putative OS=Theobroma cacao GN=TCM_035258 PE=3 SV=1
Gene Ontology
ID GO:0005488
description wall-associated receptor kinase-like 16

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000351_150 0.0 - - Wall-associated kinase 2, putative [Theobroma cacao]
2 Hb_056550_010 0.0123227552 - - PREDICTED: uncharacterized protein LOC104112577 [Nicotiana tomentosiformis]
3 Hb_087426_010 0.1056045046 - - PREDICTED: uncharacterized protein LOC105803348 [Gossypium raimondii]
4 Hb_004018_010 0.1717881243 - - PREDICTED: uncharacterized protein LOC105784835 [Gossypium raimondii]
5 Hb_000709_020 0.1994153475 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
6 Hb_075722_010 0.2206513514 - - hypothetical protein JCGZ_01984 [Jatropha curcas]
7 Hb_163663_010 0.2366366804 - - PREDICTED: uncharacterized protein LOC105629934 [Jatropha curcas]
8 Hb_012235_010 0.2466495534 - - PREDICTED: uncharacterized protein LOC104094989 [Nicotiana tomentosiformis]
9 Hb_016354_010 0.2471056807 - - -
10 Hb_079902_030 0.24967873 - - conserved hypothetical protein [Ricinus communis]
11 Hb_002042_240 0.2563086195 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
12 Hb_002850_030 0.2646607342 - - -
13 Hb_000101_280 0.3021738324 - - hypothetical protein POPTR_0018s02450g [Populus trichocarpa]
14 Hb_008408_050 0.3078138303 - - -
15 Hb_002652_010 0.3159185642 - - -
16 Hb_038508_010 0.3188007816 - - PREDICTED: uncharacterized protein LOC105638675 [Jatropha curcas]
17 Hb_012807_090 0.3219674532 - - PREDICTED: uncharacterized protein LOC100267173 [Vitis vinifera]
18 Hb_004951_050 0.3267686911 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000155_240 0.3290977003 - - PREDICTED: uncharacterized protein LOC104888642 [Beta vulgaris subsp. vulgaris]
20 Hb_014929_010 0.3291411106 - - -

Gene co-expression network

sample Hb_000351_150 Hb_000351_150 Hb_056550_010 Hb_056550_010 Hb_000351_150--Hb_056550_010 Hb_087426_010 Hb_087426_010 Hb_000351_150--Hb_087426_010 Hb_004018_010 Hb_004018_010 Hb_000351_150--Hb_004018_010 Hb_000709_020 Hb_000709_020 Hb_000351_150--Hb_000709_020 Hb_075722_010 Hb_075722_010 Hb_000351_150--Hb_075722_010 Hb_163663_010 Hb_163663_010 Hb_000351_150--Hb_163663_010 Hb_056550_010--Hb_087426_010 Hb_056550_010--Hb_004018_010 Hb_056550_010--Hb_000709_020 Hb_056550_010--Hb_075722_010 Hb_056550_010--Hb_163663_010 Hb_087426_010--Hb_000709_020 Hb_087426_010--Hb_163663_010 Hb_087426_010--Hb_004018_010 Hb_000101_280 Hb_000101_280 Hb_087426_010--Hb_000101_280 Hb_004018_010--Hb_000709_020 Hb_004018_010--Hb_163663_010 Hb_012807_090 Hb_012807_090 Hb_004018_010--Hb_012807_090 Hb_000709_020--Hb_163663_010 Hb_000709_020--Hb_000101_280 Hb_038508_010 Hb_038508_010 Hb_075722_010--Hb_038508_010 Hb_000155_240 Hb_000155_240 Hb_075722_010--Hb_000155_240 Hb_075722_010--Hb_087426_010 Hb_000789_140 Hb_000789_140 Hb_075722_010--Hb_000789_140 Hb_163663_010--Hb_000101_280
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0319415 0 0 0 0 0.00876072
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.0347519

CAGE analysis