Hb_012090_020

Information

Type -
Description -
Location Contig12090: 12396-16505
Sequence    

Annotation

kegg
ID osa:4328403
description Os02g0164300
nr
ID XP_012091334.1
description PREDICTED: probable beta-1,3-galactosyltransferase 2 [Jatropha curcas]
swissprot
ID A8MRC7
description Probable beta-1,3-galactosyltransferase 2 OS=Arabidopsis thaliana GN=B3GALT2 PE=2 SV=1
trembl
ID A0A067JAD6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21212 PE=4 SV=1
Gene Ontology
ID GO:0016757
description beta- -galactosyltransferase sqv-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012090_020 0.0 - - PREDICTED: probable beta-1,3-galactosyltransferase 2 [Jatropha curcas]
2 Hb_122028_010 0.2119777948 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
3 Hb_001390_080 0.2614070073 - - structural constituent of cell wall, putative [Ricinus communis]
4 Hb_000628_010 0.2620426395 - - PREDICTED: uncharacterized protein LOC105795966 [Gossypium raimondii]
5 Hb_008643_050 0.2622397865 - - PREDICTED: uncharacterized protein LOC105160092 [Sesamum indicum]
6 Hb_134546_010 0.2670772071 - - PREDICTED: uncharacterized protein LOC105107372 [Populus euphratica]
7 Hb_031866_030 0.2706002354 - - PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis melo]
8 Hb_002060_040 0.2718224985 - - putative polyprotein [Oryza sativa Japonica Group]
9 Hb_033066_030 0.2719081628 - - hypothetical protein PRUPE_ppa016115mg [Prunus persica]
10 Hb_009152_030 0.2723825296 - - hypothetical protein L484_026849 [Morus notabilis]
11 Hb_000608_330 0.2728896503 - - Zeamatin precursor, putative [Ricinus communis]
12 Hb_032733_020 0.276563478 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180-like isoform X4 [Citrus sinensis]
13 Hb_000826_080 0.2786446027 - - -
14 Hb_156850_130 0.2800696494 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000009_010 0.2832543386 - - PREDICTED: ABC transporter G family member 10-like [Jatropha curcas]
16 Hb_000627_010 0.2838366794 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
17 Hb_000115_040 0.288236873 - - conserved hypothetical protein [Ricinus communis]
18 Hb_003228_090 0.2901693497 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105637258 [Jatropha curcas]
19 Hb_006474_010 0.2919824571 - - hypothetical protein VITISV_032357 [Vitis vinifera]
20 Hb_001629_040 0.2939319465 - - hypothetical protein POPTR_0001s41630g [Populus trichocarpa]

Gene co-expression network

sample Hb_012090_020 Hb_012090_020 Hb_122028_010 Hb_122028_010 Hb_012090_020--Hb_122028_010 Hb_001390_080 Hb_001390_080 Hb_012090_020--Hb_001390_080 Hb_000628_010 Hb_000628_010 Hb_012090_020--Hb_000628_010 Hb_008643_050 Hb_008643_050 Hb_012090_020--Hb_008643_050 Hb_134546_010 Hb_134546_010 Hb_012090_020--Hb_134546_010 Hb_031866_030 Hb_031866_030 Hb_012090_020--Hb_031866_030 Hb_017225_010 Hb_017225_010 Hb_122028_010--Hb_017225_010 Hb_032733_020 Hb_032733_020 Hb_122028_010--Hb_032733_020 Hb_028872_020 Hb_028872_020 Hb_122028_010--Hb_028872_020 Hb_000914_190 Hb_000914_190 Hb_122028_010--Hb_000914_190 Hb_027654_010 Hb_027654_010 Hb_122028_010--Hb_027654_010 Hb_001390_080--Hb_000628_010 Hb_001390_080--Hb_008643_050 Hb_000608_330 Hb_000608_330 Hb_001390_080--Hb_000608_330 Hb_000627_010 Hb_000627_010 Hb_001390_080--Hb_000627_010 Hb_000115_040 Hb_000115_040 Hb_001390_080--Hb_000115_040 Hb_003228_090 Hb_003228_090 Hb_001390_080--Hb_003228_090 Hb_000628_010--Hb_008643_050 Hb_000628_010--Hb_000627_010 Hb_000628_010--Hb_000608_330 Hb_000628_010--Hb_000115_040 Hb_000628_010--Hb_003228_090 Hb_008643_050--Hb_000627_010 Hb_008643_050--Hb_000608_330 Hb_008643_050--Hb_000115_040 Hb_008643_050--Hb_003228_090 Hb_134546_010--Hb_000608_330 Hb_007242_030 Hb_007242_030 Hb_134546_010--Hb_007242_030 Hb_046615_030 Hb_046615_030 Hb_134546_010--Hb_046615_030 Hb_000189_400 Hb_000189_400 Hb_134546_010--Hb_000189_400 Hb_000165_170 Hb_000165_170 Hb_134546_010--Hb_000165_170 Hb_001089_010 Hb_001089_010 Hb_134546_010--Hb_001089_010 Hb_002060_040 Hb_002060_040 Hb_031866_030--Hb_002060_040 Hb_033066_030 Hb_033066_030 Hb_031866_030--Hb_033066_030 Hb_009152_030 Hb_009152_030 Hb_031866_030--Hb_009152_030 Hb_000009_010 Hb_000009_010 Hb_031866_030--Hb_000009_010 Hb_001629_040 Hb_001629_040 Hb_031866_030--Hb_001629_040 Hb_000789_140 Hb_000789_140 Hb_031866_030--Hb_000789_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0652109 0 0.0540532 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0504839 0.220915

CAGE analysis