Hb_046615_030

Information

Type -
Description -
Location Contig46615: 13014-14932
Sequence    

Annotation

kegg
ID rcu:RCOM_0906730
description zinc finger protein, putative
nr
ID XP_012092392.1
description PREDICTED: BTB/POZ domain-containing protein At3g22104-like [Jatropha curcas]
swissprot
ID Q9C5J4
description BTB/POZ domain-containing protein At3g22104 OS=Arabidopsis thaliana GN=At3g22104 PE=2 SV=1
trembl
ID A0A067JLE9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21301 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_046615_030 0.0 - - PREDICTED: BTB/POZ domain-containing protein At3g22104-like [Jatropha curcas]
2 Hb_000189_400 0.116617755 - - hypothetical protein CathTA2_0066 [Caldalkalibacillus thermarum TA2.A1]
3 Hb_000047_100 0.1239431208 transcription factor TF Family: GRF conserved hypothetical protein [Ricinus communis]
4 Hb_004837_230 0.1280066156 - - unknown [Populus trichocarpa]
5 Hb_006665_020 0.1303672453 - - PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Jatropha curcas]
6 Hb_001433_080 0.1313121103 - - Pectinesterase precursor, putative [Ricinus communis]
7 Hb_005605_010 0.1321480909 - - hypothetical protein POPTR_0019s13220g [Populus trichocarpa]
8 Hb_000640_090 0.1331513852 - - PREDICTED: calvin cycle protein CP12-2, chloroplastic-like [Jatropha curcas]
9 Hb_000083_020 0.1337805306 - - hypothetical protein JCGZ_24970 [Jatropha curcas]
10 Hb_020805_050 0.1346194867 - - PREDICTED: MLO-like protein 9 [Jatropha curcas]
11 Hb_005245_110 0.1370128504 - - hypothetical protein CISIN_1g0225141mg [Citrus sinensis]
12 Hb_185830_050 0.1372636311 - - PREDICTED: probable galactinol--sucrose galactosyltransferase 2 [Jatropha curcas]
13 Hb_025325_010 0.1402202492 - - hypothetical protein JCGZ_09061 [Jatropha curcas]
14 Hb_140249_020 0.1402780956 transcription factor TF Family: MIKC PREDICTED: MADS-box protein CMB1-like [Jatropha curcas]
15 Hb_004525_010 0.1407920614 - - late embryogenesis abundant, putative [Ricinus communis]
16 Hb_160045_010 0.1412746617 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001621_090 0.141930045 - - hypothetical protein POPTR_0010s20810g [Populus trichocarpa]
18 Hb_006901_010 0.1424326138 - - hypothetical protein JCGZ_20722 [Jatropha curcas]
19 Hb_008566_060 0.1427716914 - - conserved hypothetical protein [Ricinus communis]
20 Hb_002893_200 0.1430784761 - - aldehyde dehydrogenase, putative [Ricinus communis]

Gene co-expression network

sample Hb_046615_030 Hb_046615_030 Hb_000189_400 Hb_000189_400 Hb_046615_030--Hb_000189_400 Hb_000047_100 Hb_000047_100 Hb_046615_030--Hb_000047_100 Hb_004837_230 Hb_004837_230 Hb_046615_030--Hb_004837_230 Hb_006665_020 Hb_006665_020 Hb_046615_030--Hb_006665_020 Hb_001433_080 Hb_001433_080 Hb_046615_030--Hb_001433_080 Hb_005605_010 Hb_005605_010 Hb_046615_030--Hb_005605_010 Hb_001338_130 Hb_001338_130 Hb_000189_400--Hb_001338_130 Hb_107373_010 Hb_107373_010 Hb_000189_400--Hb_107373_010 Hb_020805_050 Hb_020805_050 Hb_000189_400--Hb_020805_050 Hb_003921_010 Hb_003921_010 Hb_000189_400--Hb_003921_010 Hb_180985_010 Hb_180985_010 Hb_000189_400--Hb_180985_010 Hb_000047_100--Hb_001433_080 Hb_140249_020 Hb_140249_020 Hb_000047_100--Hb_140249_020 Hb_000047_100--Hb_006665_020 Hb_000007_270 Hb_000007_270 Hb_000047_100--Hb_000007_270 Hb_001856_240 Hb_001856_240 Hb_000047_100--Hb_001856_240 Hb_001006_160 Hb_001006_160 Hb_000047_100--Hb_001006_160 Hb_004837_230--Hb_005605_010 Hb_005245_110 Hb_005245_110 Hb_004837_230--Hb_005245_110 Hb_000083_020 Hb_000083_020 Hb_004837_230--Hb_000083_020 Hb_004525_010 Hb_004525_010 Hb_004837_230--Hb_004525_010 Hb_007101_120 Hb_007101_120 Hb_004837_230--Hb_007101_120 Hb_000482_170 Hb_000482_170 Hb_004837_230--Hb_000482_170 Hb_001621_090 Hb_001621_090 Hb_006665_020--Hb_001621_090 Hb_005276_080 Hb_005276_080 Hb_006665_020--Hb_005276_080 Hb_006665_020--Hb_001006_160 Hb_006665_020--Hb_005605_010 Hb_000450_050 Hb_000450_050 Hb_006665_020--Hb_000450_050 Hb_006665_020--Hb_004837_230 Hb_001433_080--Hb_140249_020 Hb_006901_010 Hb_006901_010 Hb_001433_080--Hb_006901_010 Hb_001433_080--Hb_000083_020 Hb_002014_140 Hb_002014_140 Hb_001433_080--Hb_002014_140 Hb_002893_200 Hb_002893_200 Hb_001433_080--Hb_002893_200 Hb_005605_010--Hb_005245_110 Hb_005605_010--Hb_000083_020 Hb_005605_010--Hb_000482_170 Hb_005605_010--Hb_006901_010 Hb_005605_010--Hb_003921_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0276435 0.0101958 0.511458 0.0469623 0.0123509 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.00880236 0.927221

CAGE analysis