Hb_007101_120

Information

Type -
Description -
Location Contig7101: 66908-68147
Sequence    

Annotation

kegg
ID cmo:103489035
description uncharacterized LOC103489035
nr
ID XP_012092047.1
description PREDICTED: uncharacterized protein LOC105649846 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JEX6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21779 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_55245: 66955-68278
cDNA
(Sanger)
(ID:Location)		 006_J08.ab1: 66958-68119 , 034_P19.ab1: 66958-68095 , 037_L07r.ab1: 68012-71889

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007101_120 0.0 - - PREDICTED: uncharacterized protein LOC105649846 [Jatropha curcas]
2 Hb_020805_050 0.0565661136 - - PREDICTED: MLO-like protein 9 [Jatropha curcas]
3 Hb_004837_230 0.0602729855 - - unknown [Populus trichocarpa]
4 Hb_000191_090 0.0622413099 transcription factor TF Family: MYB GHMYB10, putative [Theobroma cacao]
5 Hb_005245_110 0.0678670362 - - hypothetical protein CISIN_1g0225141mg [Citrus sinensis]
6 Hb_008484_080 0.0696424321 - - PREDICTED: crocetin glucosyltransferase, chloroplastic-like [Jatropha curcas]
7 Hb_005618_030 0.073224418 - - PREDICTED: cytochrome P450 734A1-like [Jatropha curcas]
8 Hb_003921_010 0.0735596223 - - conserved hypothetical protein [Ricinus communis]
9 Hb_099182_010 0.0741864798 - - PREDICTED: uncharacterized protein LOC101214783 [Cucumis sativus]
10 Hb_000985_150 0.0756884905 - - PREDICTED: subtilisin-like protease SBT5.3 [Jatropha curcas]
11 Hb_000937_010 0.0762009031 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000625_080 0.0768672723 - - PREDICTED: ferredoxin--NADP reductase, leaf isozyme, chloroplastic [Jatropha curcas]
13 Hb_005605_010 0.0770280024 - - hypothetical protein POPTR_0019s13220g [Populus trichocarpa]
14 Hb_006665_020 0.0784892181 - - PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Jatropha curcas]
15 Hb_000482_170 0.0810823408 transcription factor TF Family: C2C2-GATA GATA nirate-inducible carbon-metabolism involved protein [Populus nigra x Populus x canadensis]
16 Hb_009193_020 0.0823710339 - - PREDICTED: epoxide hydrolase 3 [Jatropha curcas]
17 Hb_040323_010 0.0873815772 - - -
18 Hb_005276_080 0.08845743 - - PREDICTED: chloroplast stem-loop binding protein of 41 kDa a, chloroplastic [Jatropha curcas]
19 Hb_004724_440 0.091383509 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000115_020 0.0913911983 transcription factor TF Family: C2C2-CO-like zinc finger family protein [Populus trichocarpa]

Gene co-expression network

sample Hb_007101_120 Hb_007101_120 Hb_020805_050 Hb_020805_050 Hb_007101_120--Hb_020805_050 Hb_004837_230 Hb_004837_230 Hb_007101_120--Hb_004837_230 Hb_000191_090 Hb_000191_090 Hb_007101_120--Hb_000191_090 Hb_005245_110 Hb_005245_110 Hb_007101_120--Hb_005245_110 Hb_008484_080 Hb_008484_080 Hb_007101_120--Hb_008484_080 Hb_005618_030 Hb_005618_030 Hb_007101_120--Hb_005618_030 Hb_020805_050--Hb_004837_230 Hb_020805_050--Hb_008484_080 Hb_000625_080 Hb_000625_080 Hb_020805_050--Hb_000625_080 Hb_006665_020 Hb_006665_020 Hb_020805_050--Hb_006665_020 Hb_020805_050--Hb_000191_090 Hb_005605_010 Hb_005605_010 Hb_004837_230--Hb_005605_010 Hb_004837_230--Hb_005245_110 Hb_000083_020 Hb_000083_020 Hb_004837_230--Hb_000083_020 Hb_004525_010 Hb_004525_010 Hb_004837_230--Hb_004525_010 Hb_000482_170 Hb_000482_170 Hb_004837_230--Hb_000482_170 Hb_099182_010 Hb_099182_010 Hb_000191_090--Hb_099182_010 Hb_040323_010 Hb_040323_010 Hb_000191_090--Hb_040323_010 Hb_004724_440 Hb_004724_440 Hb_000191_090--Hb_004724_440 Hb_000191_090--Hb_008484_080 Hb_171810_030 Hb_171810_030 Hb_000191_090--Hb_171810_030 Hb_023313_050 Hb_023313_050 Hb_000191_090--Hb_023313_050 Hb_003921_010 Hb_003921_010 Hb_005245_110--Hb_003921_010 Hb_005245_110--Hb_005605_010 Hb_005245_110--Hb_000083_020 Hb_005245_110--Hb_000482_170 Hb_001823_010 Hb_001823_010 Hb_005245_110--Hb_001823_010 Hb_008484_080--Hb_099182_010 Hb_008484_080--Hb_023313_050 Hb_008484_080--Hb_040323_010 Hb_002434_040 Hb_002434_040 Hb_008484_080--Hb_002434_040 Hb_000977_250 Hb_000977_250 Hb_008484_080--Hb_000977_250 Hb_000030_070 Hb_000030_070 Hb_005618_030--Hb_000030_070 Hb_008013_020 Hb_008013_020 Hb_005618_030--Hb_008013_020 Hb_003683_170 Hb_003683_170 Hb_005618_030--Hb_003683_170 Hb_006555_020 Hb_006555_020 Hb_005618_030--Hb_006555_020 Hb_096267_010 Hb_096267_010 Hb_005618_030--Hb_096267_010 Hb_000937_010 Hb_000937_010 Hb_005618_030--Hb_000937_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.293944 24.9268 2.80736 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0601088 0 0.086156 0.152625 30.3285

CAGE analysis