Hb_000668_100

Information

Type -
Description -
Location Contig668: 73165-74880
Sequence    

Annotation

kegg
ID tcc:TCM_034956
description Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
nr
ID XP_012078347.1
description PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Jatropha curcas]
swissprot
ID Q8VYI9
description Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thaliana GN=At5g64080 PE=1 SV=1
trembl
ID A0A067K9B6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11989 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000668_100 0.0 - - PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Jatropha curcas]
2 Hb_005694_100 0.1543860438 - - PREDICTED: calcium-binding protein KIC-like [Populus euphratica]
3 Hb_008059_040 0.1844936097 - - hypothetical protein POPTR_0019s12360g [Populus trichocarpa]
4 Hb_005511_080 0.1934702094 - - Protein MLO, putative [Ricinus communis]
5 Hb_001022_020 0.1945440523 transcription factor TF Family: NAC NAC transcription factor 038 [Jatropha curcas]
6 Hb_001241_020 0.1961342654 - - PREDICTED: uncharacterized protein LOC105628311 [Jatropha curcas]
7 Hb_001218_060 0.1966537647 - - conserved hypothetical protein [Ricinus communis]
8 Hb_002301_330 0.1987520428 - - PREDICTED: late embryogenesis abundant protein, group 3-like [Jatropha curcas]
9 Hb_078954_020 0.1992184984 - - PREDICTED: cytochrome P450 76A1-like [Jatropha curcas]
10 Hb_002639_170 0.1994218521 - - carboxy-lyase, putative [Ricinus communis]
11 Hb_011609_130 0.2001681337 - - -
12 Hb_103709_010 0.201201908 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
13 Hb_012084_010 0.2048395362 - - cold regulated protein [Manihot esculenta]
14 Hb_005162_120 0.2049842121 - - ferric reductase oxidase [Manihot esculenta]
15 Hb_001606_040 0.2067534714 - - Rho GDP-dissociation inhibitor, putative [Ricinus communis]
16 Hb_163140_010 0.2073941541 transcription factor TF Family: MYB PREDICTED: myb-related protein Myb4-like [Jatropha curcas]
17 Hb_065256_010 0.2128978558 - - tryptophan synthase beta chain, putative [Ricinus communis]
18 Hb_001143_200 0.2180920384 transcription factor TF Family: NAC NAC domain protein [Glycine max]
19 Hb_149985_030 0.2187745647 - - PREDICTED: zeatin O-glucosyltransferase-like [Jatropha curcas]
20 Hb_000349_170 0.2190612086 - - PREDICTED: geraniol 8-hydroxylase-like [Jatropha curcas]

Gene co-expression network

sample Hb_000668_100 Hb_000668_100 Hb_005694_100 Hb_005694_100 Hb_000668_100--Hb_005694_100 Hb_008059_040 Hb_008059_040 Hb_000668_100--Hb_008059_040 Hb_005511_080 Hb_005511_080 Hb_000668_100--Hb_005511_080 Hb_001022_020 Hb_001022_020 Hb_000668_100--Hb_001022_020 Hb_001241_020 Hb_001241_020 Hb_000668_100--Hb_001241_020 Hb_001218_060 Hb_001218_060 Hb_000668_100--Hb_001218_060 Hb_002301_330 Hb_002301_330 Hb_005694_100--Hb_002301_330 Hb_000417_270 Hb_000417_270 Hb_005694_100--Hb_000417_270 Hb_005694_100--Hb_001022_020 Hb_005694_100--Hb_008059_040 Hb_065256_010 Hb_065256_010 Hb_005694_100--Hb_065256_010 Hb_103709_010 Hb_103709_010 Hb_008059_040--Hb_103709_010 Hb_012084_010 Hb_012084_010 Hb_008059_040--Hb_012084_010 Hb_003964_050 Hb_003964_050 Hb_008059_040--Hb_003964_050 Hb_008059_040--Hb_001218_060 Hb_078954_020 Hb_078954_020 Hb_008059_040--Hb_078954_020 Hb_005839_080 Hb_005839_080 Hb_008059_040--Hb_005839_080 Hb_005511_080--Hb_001218_060 Hb_104014_010 Hb_104014_010 Hb_005511_080--Hb_104014_010 Hb_001123_340 Hb_001123_340 Hb_005511_080--Hb_001123_340 Hb_002561_040 Hb_002561_040 Hb_005511_080--Hb_002561_040 Hb_005511_080--Hb_065256_010 Hb_005888_060 Hb_005888_060 Hb_005511_080--Hb_005888_060 Hb_001396_040 Hb_001396_040 Hb_001022_020--Hb_001396_040 Hb_002374_200 Hb_002374_200 Hb_001022_020--Hb_002374_200 Hb_003038_110 Hb_003038_110 Hb_001022_020--Hb_003038_110 Hb_000042_020 Hb_000042_020 Hb_001022_020--Hb_000042_020 Hb_006120_120 Hb_006120_120 Hb_001022_020--Hb_006120_120 Hb_000243_180 Hb_000243_180 Hb_001241_020--Hb_000243_180 Hb_011609_130 Hb_011609_130 Hb_001241_020--Hb_011609_130 Hb_001926_010 Hb_001926_010 Hb_001241_020--Hb_001926_010 Hb_006909_050 Hb_006909_050 Hb_001241_020--Hb_006909_050 Hb_000731_030 Hb_000731_030 Hb_001241_020--Hb_000731_030 Hb_000028_010 Hb_000028_010 Hb_001241_020--Hb_000028_010 Hb_000282_010 Hb_000282_010 Hb_001218_060--Hb_000282_010 Hb_001218_060--Hb_001123_340 Hb_001218_060--Hb_078954_020 Hb_001218_060--Hb_012084_010 Hb_003077_010 Hb_003077_010 Hb_001218_060--Hb_003077_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.142076 1.12358 0.0520504 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0843714 0 0 0.162174

CAGE analysis