Hb_000563_510

Information

Type -
Description -
Location Contig563: 370497-372282
Sequence    

Annotation

kegg
ID rcu:RCOM_0681990
description epoxide hydrolase, putative (EC:2.7.10.2)
nr
ID XP_002516953.1
description epoxide hydrolase, putative [Ricinus communis]
swissprot
ID Q6Q2C2
description Bifunctional epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV=1
trembl
ID B9RT84
description Epoxide hydrolase, putative OS=Ricinus communis GN=RCOM_0681990 PE=4 SV=1
Gene Ontology
ID GO:0004715
description bifunctional epoxide hydrolase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000563_510 0.0 - - epoxide hydrolase, putative [Ricinus communis]
2 Hb_002965_070 0.1406761732 - - PREDICTED: extensin [Jatropha curcas]
3 Hb_002960_100 0.1542966028 - - PREDICTED: receptor protein kinase CLAVATA1 [Jatropha curcas]
4 Hb_006694_030 0.16201696 - - -
5 Hb_089114_010 0.1708033817 - - PREDICTED: uncharacterized protein LOC105646926 [Jatropha curcas]
6 Hb_004837_200 0.1790635914 - - hypothetical protein POPTR_0001s26450g [Populus trichocarpa]
7 Hb_086614_010 0.1926226258 transcription factor TF Family: Orphans PREDICTED: zinc finger protein HD1-like isoform X1 [Jatropha curcas]
8 Hb_000059_260 0.1952140923 - - PREDICTED: LOW QUALITY PROTEIN: peroxidase 60 [Jatropha curcas]
9 Hb_000540_220 0.1961485391 - - hypothetical protein JCGZ_05605 [Jatropha curcas]
10 Hb_061908_030 0.1962169061 - - PREDICTED: putative disease resistance protein At3g14460 [Jatropha curcas]
11 Hb_000308_010 0.1998534502 - - PREDICTED: uncharacterized protein LOC105639684 [Jatropha curcas]
12 Hb_021443_030 0.201172118 - - PREDICTED: uncharacterized protein LOC105648566 [Jatropha curcas]
13 Hb_001310_010 0.2016551825 - - PREDICTED: calcium-transporting ATPase 2, plasma membrane-type [Jatropha curcas]
14 Hb_164146_020 0.2063805386 - - metal ion binding protein, putative [Ricinus communis]
15 Hb_002095_030 0.2150609538 - - hypothetical protein MIMGU_mgv1a021906mg, partial [Erythranthe guttata]
16 Hb_047442_010 0.2153072286 - - PREDICTED: double-stranded RNA-binding protein 2 [Jatropha curcas]
17 Hb_008173_130 0.2156423341 - - PREDICTED: uncharacterized protein LOC105645815 isoform X1 [Jatropha curcas]
18 Hb_000317_190 0.2169001971 - - PREDICTED: diacylglycerol kinase 5-like [Jatropha curcas]
19 Hb_006615_060 0.2173412817 - - conserved hypothetical protein [Ricinus communis]
20 Hb_011918_030 0.2180056523 - - PREDICTED: nudix hydrolase 4 [Jatropha curcas]

Gene co-expression network

sample Hb_000563_510 Hb_000563_510 Hb_002965_070 Hb_002965_070 Hb_000563_510--Hb_002965_070 Hb_002960_100 Hb_002960_100 Hb_000563_510--Hb_002960_100 Hb_006694_030 Hb_006694_030 Hb_000563_510--Hb_006694_030 Hb_089114_010 Hb_089114_010 Hb_000563_510--Hb_089114_010 Hb_004837_200 Hb_004837_200 Hb_000563_510--Hb_004837_200 Hb_086614_010 Hb_086614_010 Hb_000563_510--Hb_086614_010 Hb_047442_010 Hb_047442_010 Hb_002965_070--Hb_047442_010 Hb_002965_070--Hb_089114_010 Hb_000317_190 Hb_000317_190 Hb_002965_070--Hb_000317_190 Hb_000308_010 Hb_000308_010 Hb_002965_070--Hb_000308_010 Hb_033930_010 Hb_033930_010 Hb_002965_070--Hb_033930_010 Hb_001310_010 Hb_001310_010 Hb_002960_100--Hb_001310_010 Hb_010126_030 Hb_010126_030 Hb_002960_100--Hb_010126_030 Hb_001999_170 Hb_001999_170 Hb_002960_100--Hb_001999_170 Hb_061908_030 Hb_061908_030 Hb_002960_100--Hb_061908_030 Hb_000059_260 Hb_000059_260 Hb_002960_100--Hb_000059_260 Hb_004612_020 Hb_004612_020 Hb_002960_100--Hb_004612_020 Hb_006694_030--Hb_002965_070 Hb_001481_010 Hb_001481_010 Hb_006694_030--Hb_001481_010 Hb_006694_030--Hb_089114_010 Hb_006694_030--Hb_033930_010 Hb_006694_030--Hb_000317_190 Hb_089114_010--Hb_061908_030 Hb_089114_010--Hb_033930_010 Hb_089114_010--Hb_047442_010 Hb_089114_010--Hb_000317_190 Hb_001894_160 Hb_001894_160 Hb_089114_010--Hb_001894_160 Hb_003078_070 Hb_003078_070 Hb_004837_200--Hb_003078_070 Hb_000836_420 Hb_000836_420 Hb_004837_200--Hb_000836_420 Hb_189208_060 Hb_189208_060 Hb_004837_200--Hb_189208_060 Hb_001369_670 Hb_001369_670 Hb_004837_200--Hb_001369_670 Hb_000172_410 Hb_000172_410 Hb_004837_200--Hb_000172_410 Hb_001769_120 Hb_001769_120 Hb_004837_200--Hb_001769_120 Hb_018633_010 Hb_018633_010 Hb_086614_010--Hb_018633_010 Hb_077694_010 Hb_077694_010 Hb_086614_010--Hb_077694_010 Hb_000111_240 Hb_000111_240 Hb_086614_010--Hb_000111_240 Hb_006615_060 Hb_006615_060 Hb_086614_010--Hb_006615_060 Hb_074672_010 Hb_074672_010 Hb_086614_010--Hb_074672_010 Hb_164146_020 Hb_164146_020 Hb_086614_010--Hb_164146_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.63222 11.983 16.3255 1.67154 0.730535 0.655463
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0591418 0.662095 2.82924

CAGE analysis