Hb_006694_030

Information

Type -
Description -
Location Contig6694: 12412-18594
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006694_030 0.0 - - -
2 Hb_000563_510 0.16201696 - - epoxide hydrolase, putative [Ricinus communis]
3 Hb_002965_070 0.1859421408 - - PREDICTED: extensin [Jatropha curcas]
4 Hb_001481_010 0.1887330516 - - PREDICTED: uncharacterized protein LOC105632300 isoform X1 [Jatropha curcas]
5 Hb_089114_010 0.2018867969 - - PREDICTED: uncharacterized protein LOC105646926 [Jatropha curcas]
6 Hb_033930_010 0.2203273453 - - PREDICTED: uncharacterized protein LOC105635519 [Jatropha curcas]
7 Hb_000317_190 0.2265152305 - - PREDICTED: diacylglycerol kinase 5-like [Jatropha curcas]
8 Hb_032202_050 0.229099959 transcription factor TF Family: TCP conserved hypothetical protein [Ricinus communis]
9 Hb_001269_510 0.2313476544 - - Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
10 Hb_002639_130 0.232617161 - - hypothetical protein JCGZ_08129 [Jatropha curcas]
11 Hb_002910_010 0.2353402638 - - PREDICTED: uncharacterized protein LOC105635519 [Jatropha curcas]
12 Hb_000540_220 0.2372172431 - - hypothetical protein JCGZ_05605 [Jatropha curcas]
13 Hb_001776_200 0.237455906 - - PREDICTED: COP9 signalosome complex subunit 2 isoform X2 [Pyrus x bretschneideri]
14 Hb_005568_090 0.2408084365 - - WD-repeat protein, putative [Ricinus communis]
15 Hb_044086_010 0.2445706684 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
16 Hb_047442_010 0.2457514192 - - PREDICTED: double-stranded RNA-binding protein 2 [Jatropha curcas]
17 Hb_005941_020 0.2464462734 - - PREDICTED: double-stranded RNA-binding protein 2 [Jatropha curcas]
18 Hb_065755_020 0.2475689462 - - choline monooxygenase, putative [Ricinus communis]
19 Hb_074184_010 0.2491521243 - - eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis]
20 Hb_002960_100 0.2503369871 - - PREDICTED: receptor protein kinase CLAVATA1 [Jatropha curcas]

Gene co-expression network

sample Hb_006694_030 Hb_006694_030 Hb_000563_510 Hb_000563_510 Hb_006694_030--Hb_000563_510 Hb_002965_070 Hb_002965_070 Hb_006694_030--Hb_002965_070 Hb_001481_010 Hb_001481_010 Hb_006694_030--Hb_001481_010 Hb_089114_010 Hb_089114_010 Hb_006694_030--Hb_089114_010 Hb_033930_010 Hb_033930_010 Hb_006694_030--Hb_033930_010 Hb_000317_190 Hb_000317_190 Hb_006694_030--Hb_000317_190 Hb_000563_510--Hb_002965_070 Hb_002960_100 Hb_002960_100 Hb_000563_510--Hb_002960_100 Hb_000563_510--Hb_089114_010 Hb_004837_200 Hb_004837_200 Hb_000563_510--Hb_004837_200 Hb_086614_010 Hb_086614_010 Hb_000563_510--Hb_086614_010 Hb_047442_010 Hb_047442_010 Hb_002965_070--Hb_047442_010 Hb_002965_070--Hb_089114_010 Hb_002965_070--Hb_000317_190 Hb_000308_010 Hb_000308_010 Hb_002965_070--Hb_000308_010 Hb_002965_070--Hb_033930_010 Hb_001079_030 Hb_001079_030 Hb_001481_010--Hb_001079_030 Hb_000803_310 Hb_000803_310 Hb_001481_010--Hb_000803_310 Hb_000058_050 Hb_000058_050 Hb_001481_010--Hb_000058_050 Hb_001409_050 Hb_001409_050 Hb_001481_010--Hb_001409_050 Hb_000834_050 Hb_000834_050 Hb_001481_010--Hb_000834_050 Hb_061908_030 Hb_061908_030 Hb_089114_010--Hb_061908_030 Hb_089114_010--Hb_033930_010 Hb_089114_010--Hb_047442_010 Hb_089114_010--Hb_000317_190 Hb_001894_160 Hb_001894_160 Hb_089114_010--Hb_001894_160 Hb_005941_020 Hb_005941_020 Hb_033930_010--Hb_005941_020 Hb_033930_010--Hb_001894_160 Hb_011671_110 Hb_011671_110 Hb_033930_010--Hb_011671_110 Hb_000318_410 Hb_000318_410 Hb_033930_010--Hb_000318_410 Hb_000622_210 Hb_000622_210 Hb_033930_010--Hb_000622_210 Hb_000086_640 Hb_000086_640 Hb_033930_010--Hb_000086_640 Hb_000317_190--Hb_005941_020 Hb_124951_010 Hb_124951_010 Hb_000317_190--Hb_124951_010 Hb_000317_190--Hb_047442_010 Hb_000317_190--Hb_001894_160 Hb_000317_190--Hb_011671_110 Hb_015026_020 Hb_015026_020 Hb_000317_190--Hb_015026_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0528917 0.3187 0.34947 0.0217091 0.0796421 0.0233493
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0385639 0.0966041

CAGE analysis